Job Description P27828 Confidence 99.91% Date Thu Jan 5 11:44:04 GMT 2012 Rank 26 Aligned Residues 365 % Identity 12% Template c3ia7A_ PDB info PDB header:transferase Chain: A: PDB Molecule:calg4; PDBTitle: crystal structure of calg4, the calicheamicin glycosyltransferase Resolution 1.91 Å

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		1	.	.	.	.	.	.		.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.													.
Predicted Secondary structure									.																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence									.																																																												.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	L	T	V	F	.	G	T	R	P	E	A	I	K	M	A	P	L	V	H	A	L	A	K	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P	G	Q	G	.	.	.	.	.	.	.	.	.	.	.	.	L
Query Conservation									.																																																												.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence									.																				.																																								.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																													.
Template Sequence		R	H	I	L	F	A	N	V	Q	G	H	G	H	V	Y	P	S	L	G	L	V	S	E	L	A	R	R	.	G	H	R	I	T	Y	V	T	T	P	L	F	A	D	E	V	K	A	A	G	A	E	V	V	L	Y	K	S	E	F	D	T	F	H	V	P	E	V	V	K	Q	E	D	A	E	T	Q	L	H	L	V	Y
Template Known Secondary structure										S	S																	T	.	T																		T	T									G	G	G	T	S	S	S	S	S	S	S			T	T
Template Predicted Secondary structure																													.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30		.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	I	T	C	R	I	L	E	G	L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	M	Y	H	F	S
Query Conservation
Alig confidence																												.	.
Template Conservation																												.	.
Template Sequence		V	R	E	N	V	A	I	L	R	A	A	E	E	A	L	G	D	N	P	P	D	L	V	V	Y	D	.	.	V	F	P	F	I	A	G	R	L	L	A	A	R	W	D	R	P	A	V	R	L	T	G	G	F	A	A	N	E	H	Y	S	L	F	K	E	L	W	K	S	N	G	Q	R	H	P	A	D	V	E	A	V
Template Known Secondary structure																	T	T				S						.	.	S	T	T												T								S	S				B	T	T	B											T				G	G	G	S
Template Predicted Secondary structure																												.	.
Template SS confidence
		83	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.			.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.						.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.
Predicted Secondary structure																																																.	.	.	.	.
Query SS confidence																																																.	.	.	.	.
Query Sequence		P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	.	.	.	.	.	L	A	A	N	Y	P	F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F
Query Conservation																																																.	.	.	.	.
Alig confidence																																																.	.	.	.	.
Template Conservation
Template Sequence		H	S	V	L	V	D	L	L	G	K	Y	G	V	D	T	P	V	K	E	Y	W	D	E	I	E	G	L	T	I	V	F	L	P	K	S	F	Q	P	F	A	E	T	F	D	E	R	F	A	F	V	G	P	T	L	T	G	P	G	W	Q	P	P	R	P	D	A	P	V	L	L	V	S	L	G	N	Q	F	N	E	H
Template Known Secondary structure											T	T	T			S							T				S					S	S		G	G	G	S	T	T	G	G	G			T	T																S	S	T	T										S		S	S
Template Predicted Secondary structure
Template SS confidence
		161	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		223	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.				.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																			.	.	.
Query SS confidence																																																																			.	.	.
Query Sequence		E	E	I	C	H	A	L	A	D	I	A	T	T	H	Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	.	.	.	T	D	S	G	G	I	Q	E	E	A	P	S
Query Conservation																																																																			.	.	.
Alig confidence																														.	.	.	.	.																																	.	.	.
Template Conservation																														.	.	.	.	.
Template Sequence		P	E	F	F	R	A	C	A	Q	A	F	A	D	T	P	W	H	V	V	X	A	I	G	G	F	L	D	P	.	.	.	.	.	A	V	L	G	P	L	P	P	N	V	E	A	H	Q	W	I	P	F	H	S	V	L	A	H	A	R	A	C	L	T	H	G	T	T	G	A	V	L	E	A	F	A	A	G	V	P	L
Template Known Secondary structure													T	T	S	S									T	T	S		G	.	.	.	.	.	G	G	G		S			T	T					S									T	T																			T	T
Template Predicted Secondary structure																														.	.	.	.	.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.						.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.				.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																															.	.	.
Query SS confidence																															.	.	.
Query Sequence		L	G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	R	L	V	G	T	D	.	.	.	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y	G	D	G	Q	A	C	S	R	I	L	E	A	L	K	N	N	R
Query Conservation																															.	.	.
Alig confidence																															.	.	.
Template Conservation
Template Sequence		V	L	V	P	H	F	A	T	E	A	A	P	S	A	E	R	V	I	E	L	G	L	G	S	V	L	R	P	D	Q	L	E	P	A	S	I	R	E	A	V	E	R	L	A	A	D	S	A	V	R	E	R	V	R	R	X	Q	R	D	I	L	S	S	G	G	P	A	R	A	A	D	E	V	E	A	Y	L
Template Known Secondary structure					G	G	G		G	G	G										T	T	S						G	G	G		S																														T	S
Template Predicted Secondary structure
Template SS confidence
		320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions