Job Description P27828 Confidence 23.20% Date Thu Jan 5 11:44:04 GMT 2012 Rank 462 Aligned Residues 71 % Identity 11% Template c3dzdA_ PDB info PDB header:transcription regulator Chain: A: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4 in the inactive2 state Resolution 2.40 Å

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		301	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.					.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																			.	.	.	.									.
Query SS confidence																			.	.	.	.									.
Query Sequence		G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	A	V	.	.	.	.	T	A	G	T	V	R	L	V	.	G	T	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y	G	D	G	Q	A	C	S	R	I	L	E	A	L	K	N
Query Conservation																			.	.	.	.									.
Alig confidence																			.	.	.	.									.
Template Conservation
Template Sequence		D	S	V	V	I	V	I	T	G	H	G	S	V	D	T	A	V	K	A	I	K	K	G	A	Y	E	F	L	E	K	P	F	S	V	E	R	F	L	L	T	I	K	H	A	F	E	E	Y	S	K	K	A	P	P	Q	E	E	I	E	F	V	G	E	H	P	K	I	L	E	I	K	R	L	I	P	K
Template Known Secondary structure		T									S	S												T							S	S																		S															S
Template Predicted Secondary structure
Template SS confidence
		73	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions