Job Description P27828 Confidence 100.00% Date Thu Jan 5 11:44:04 GMT 2012 Rank 6 Aligned Residues 361 % Identity 14% Template c3c4vB_ PDB info PDB header:transferase Chain: B: PDB Molecule:predicted glycosyltransferases; PDBTitle: structure of the retaining glycosyltransferase msha:the2 first step in mycothiol biosynthesis. organism:3 corynebacterium glutamicum : complex with udp and 1l-ins-1-4 p. Resolution 2.60 Å

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		1	.	.	.	.	.	.	.	.	10	.	.	.													.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.						.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.
Predicted Secondary structure															.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query SS confidence															.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Query Sequence		M	K	V	L	T	V	F	G	T	R	P	E	A	.	.	.	.	.	.	.	.	.	.	.	.	I	K	M	A	P	L	V	H	A	L	A	K	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	.	.	.	.	.	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P
Query Conservation															.	.	.	.	.	.	.	.	.	.	.	.																																.	.	.	.	.
Alig confidence															.	.	.	.	.	.	.	.	.	.	.	.														.																		.	.	.	.	.
Template Conservation																																								.
Template Sequence		M	R	V	A	M	I	S	M	H	T	S	P	L	Q	Q	P	G	T	G	D	S	G	G	M	N	V	Y	I	L	S	T	A	T	E	L	A	K	Q	.	G	I	E	V	D	I	Y	T	R	A	T	R	P	S	Q	G	E	I	V	R	V	A	E	N	L	R	V	I	N	I	A	A	G	P	Y	E	G	L	S	K	E
Template Known Secondary structure									T	T	S		T	T	S		T	T	B	T	T	B	S																T	.	T												G	G	G		S						T	T									S		S	S	S			T	T
Template Predicted Secondary structure																																								.
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.		.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		64	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	Q	G	L	T	E	I	T	C	R	I	L	E	G	L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		E	L	P	T	Q	L	A	A	F	T	G	G	M	L	S	F	T	R	R	E	K	V	T	Y	D	L	I	H	S	H	Y	W	L	S	G	Q	V	G	W	L	L	R	D	L	W	R	I	P	L	I	H	T	A	H	T	L	A	A	V	S	D	T	P	E	S	E	A	R	R	I	C	E	Q	Q	L	V	D	N	A	D
Template Known Secondary structure		T	G	G	G	G															T	T				S																					T								S	S		S																							S
Template Predicted Secondary structure
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.
		144	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	H	F	S	P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	L	A	A	N	Y	P	F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F	E
Query Conservation
Alig confidence																																																.	.	.	.	.	.	.
Template Conservation																																																.	.	.	.	.	.	.
Template Sequence		V	L	A	V	N	T	Q	E	E	M	Q	D	L	M	H	H	Y	D	A	D	P	D	R	I	S	V	V	S	P	G	A	D	V	E	L	Y	S	P	G	N	D	R	A	T	E	R	.	.	.	.	.	.	.	S	R	R	E	L	G	I	P	L	H	T	K	V	V	A	F	V	G	R	L	Q	P	F	K	G	P	Q
Template Known Secondary structure						S	S															G	G	G								B		T	T	T	S				S	T	T					.	.	.	.	.	.	.					T	T			S	S	S							S			S	G	G	G
Template Predicted Secondary structure																																																.	.	.	.	.	.	.
Template SS confidence
		167	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.								.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
		224	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																		.	.	.	.	.
Query SS confidence																																																																		.	.	.	.	.
Query Sequence		E	I	C	H	A	L	A	D	I	A	T	T	H	Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	.	.	.	.	.	T	D	S	G	G	I	Q	E	E	A	P
Query Conservation																																																																		.	.	.	.	.
Alig confidence																													.	.																																				.	.	.	.	.
Template Conservation																													.	.
Template Sequence		V	L	I	K	A	V	A	A	L	F	D	R	D	P	D	R	N	L	R	V	I	I	C	G	G	P	Y	.	.	R	H	M	A	E	E	L	G	V	E	K	R	I	R	F	L	D	P	R	P	P	S	E	L	V	A	V	Y	R	A	A	D	I	V	A	V	P	S	F	N	E	S	F	G	L	V	A	M	E	A	Q
Template Known Secondary structure															T	T													.	.								T		G	G	G																				S							S	S		S	S
Template Predicted Secondary structure																													.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.			.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.		.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.
Predicted Secondary structure																													.
Query SS confidence																													.
Query Sequence		S	L	G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	R	L	V	.	G	T	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y	G	D	G	Q	A	C	S	R	I	L	E	A	L	K	N
Query Conservation																													.
Alig confidence																													.
Template Conservation
Template Sequence		A	S	G	T	P	V	I	A	A	R	V	G	G	L	P	I	A	V	A	E	G	E	T	G	L	L	V	D	G	H	S	P	H	A	W	A	D	A	L	A	T	L	L	D	D	D	E	T	R	I	R	M	G	E	D	A	V	E	H	A	R	T	F	S	W	A	A	T	A	A	Q	L	S	S
Template Known Secondary structure			T	T							S		T	T					S		B	T	T	T					S	S															S																		T		B
Template Predicted Secondary structure
Template SS confidence
		327	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions