Job Description P27828 Confidence 99.95% Date Thu Jan 5 11:44:04 GMT 2012 Rank 21 Aligned Residues 335 % Identity 12% Template c2x0dA_ PDB info PDB header:transferase Chain: A: PDB Molecule:wsaf; PDBTitle: apo structure of wsaf Resolution 2.28 Å

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		1	.	.	.	.	.	.	.	.	10							.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.
Predicted Secondary structure												.	.	.	.	.	.
Query SS confidence												.	.	.	.	.	.
Query Sequence		M	K	V	L	T	V	F	G	T	R	.	.	.	.	.	.	P	E	A	I	K	M	A	P	L	V	H	A	L	A	K	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P	G	Q	G	L	T	E	I	T	C	R	I
Query Conservation												.	.	.	.	.	.
Alig confidence												.	.	.	.	.	.																	.																						.	.	.	.	.
Template Conservation																																		.																						.	.	.	.	.
Template Sequence		K	R	L	N	L	L	V	P	S	I	N	Q	E	H	X	F	G	G	I	S	T	A	L	K	L	F	E	Q	F	D	N	K	.	K	F	K	K	R	I	I	L	T	D	A	T	P	N	P	K	D	L	Q	S	F	.	.	.	.	.	K	S	F	K	Y	V	X	P	E	E	D	K	D	F	A	L	Q	I	V	P	F
Template Known Secondary structure									S				G	G	G		S											T	T	S		T	T	.	T								S	S									G	G	G	.	.	.	.	.	T	T	S					T	T						S
Template Predicted Secondary structure																																		.																						.	.	.	.	.
Template SS confidence
		47	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.		.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.						100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120
		75	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.								.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.
Predicted Secondary structure																																				.	.	.	.	.	.	.
Query SS confidence																																				.	.	.	.	.	.	.
Query Sequence		L	E	G	L	K	P	I	L	A	E	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	.	.	.	.	.	.	.	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T	L	T	G	H	L	A	M	Y	H	F	S
Query Conservation																																				.	.	.	.	.	.	.
Alig confidence																																				.	.	.	.	.	.	.
Template Conservation
Template Sequence		N	D	R	Y	N	R	T	I	P	V	A	K	H	D	I	F	I	A	T	A	W	W	T	A	Y	A	A	Q	R	I	V	S	W	Q	S	D	T	Y	G	I	P	P	N	K	I	L	Y	I	I	Q	D	F	E	P	G	F	Y	Q	W	S	S	Q	Y	V	L	A	E	S	T	Y	K	Y	R	G	P	Q	I	A	V	F
Template Known Secondary structure		S			T	T							T	T							S																			T												S		G	G	G	G	S		S	S									T	T	S			S
Template Predicted Secondary structure
Template SS confidence
		121	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200
		148	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	L	A	A	N	Y	P	F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E	S	F	G	R	G	F	E	E	I	C	H
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	S	E	L	L	K	Q	Y	F	N	N	K	G	Y	N	F	T	D	E	Y	F	F	Q	P	K	I	N	T	T	L	K	N	Y	I	N	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	K	R	Q	K	E	K	I	I	L	V	Y	G	R	P	S	V	K	R	N	A	F	T	L	I	V	E
Template Known Secondary structure			S											T				S															T	T	T	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S						S								T	T		G	G	G
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		201	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.																			.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.
		228	.	230	.	.	.	.	.	.	.				.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.						.	.	290	.	.	.	.	.	.	.	.	.
Predicted Secondary structure												.	.	.																																																			.	.	.	.	.
Query SS confidence												.	.	.																																																			.	.	.	.	.
Query Sequence		A	L	A	D	I	A	T	T	H	Q	.	.	.	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	.	.	.	.	.	T	D	S	G	G	I	Q	E	E	A	P	S
Query Conservation												.	.	.																																																			.	.	.	.	.
Alig confidence												.	.	.															.	.	.	.	.	.																															.	.	.	.	.
Template Conservation																													.	.	.	.	.	.
Template Sequence		A	L	K	I	F	V	Q	K	Y	D	R	S	N	E	W	K	I	I	S	V	G	E	K	H	K	D	I	.	.	.	.	.	.	A	L	G	K	G	I	H	L	N	S	L	G	K	L	T	L	E	D	Y	A	D	L	L	K	R	S	S	I	G	I	S	L	X	I	S	P	H	P	S	Y	P	P	L	E	X	A	H
Template Known Secondary structure											T	T	G	G	G								S						.	.	.	.	.	.				T	T								S																					S	S	S	S			S
Template Predicted Secondary structure																													.	.	.	.	.	.
Template SS confidence
		263	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.							290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.		.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																														.
Query SS confidence																														.
Query Sequence		L	G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	R	L	V	G	T	.	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y	G	D	G	Q	A	C	S	R	I	L	E	A	L
Query Conservation																														.
Alig confidence										.																				.																																.	.	.
Template Conservation										.																																																				.	.	.
Template Sequence		F	G	L	R	V	I	T	N	.	K	Y	E	N	K	D	L	S	N	W	H	S	N	I	V	S	L	E	Q	L	N	P	E	N	I	A	E	T	L	V	E	L	C	X	S	F	N	E	S	S	N	X	X	F	Y	I	N	E	F	S	F	.	.	.	I	K	E	I	E	E	K	L
Template Known Secondary structure		T	T							.		B	T	T	B		G	G	G	T	B	T	T					S	S		S															T				B	S		G	G	G					T	T	.	.	.						T	T
Template Predicted Secondary structure										.																																																				.	.	.
Template SS confidence
		337	.	.	340	.	.	.	.		.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.				.	.	.	.	400	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions