Job Description P27828 Confidence 99.90% Date Thu Jan 5 11:44:04 GMT 2012 Rank 31 Aligned Residues 321 % Identity 10% Template c2q6vA_ PDB info PDB header:transferase Chain: A: PDB Molecule:glucuronosyltransferase gumk; PDBTitle: crystal structure of gumk in complex with udp Resolution 2.28 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.			.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.													.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.
Predicted Secondary structure																.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	K	V	L	T	V	F	G	T	R	P	E	A	I	.	.	K	M	A	P	L	V	H	A	L	A	K	D	P	F	F	E	A	K	V	C	V	T	A	Q	H	R	E	M	L	D	Q	V	L	K	.	.	.	.	.	.	.	.	.	.	.	.	L	F	S	I	V	P	D	Y	D	L	N	I	M	Q	P	G	Q	G
Query Conservation																.	.																																			.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.													.																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																														.
Template Sequence		C	Y	L	V	L	S	S	H	D	F	R	T	P	R	R	A	N	I	H	F	I	T	D	Q	L	A	L	R	.	G	T	T	R	F	F	S	L	R	Y	S	R	L	S	R	M	K	G	D	M	R	L	P	L	D	D	T	A	N	T	V	V	S	H	N	G	V	D	C	Y	L	W	R	T	T	V	H	P	F	N	T
Template Known Secondary structure								S	S		T	T		S	S															.	S								S		B	S	G	G	G	T	T	T		T	T	G	G	G	G	G	G	T	T	S					T	T								B	S	S
Template Predicted Secondary structure																														.
Template SS confidence
		16	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.		.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
		67	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.											.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.	.	.	.	.
Query Sequence		L	T	E	I	T	C	R	I	L	E	G	L	K	P	I	L	A	E	.	.	.	.	.	.	.	.	.	.	F	K	P	D	V	V	L	V	H	G	D	T	T	T	T	L	A	T	S	L	A	A	F	Y	Q	R	I	P	V	G	H	V	E	A	G	L	R	T	G	D	L	Y	S	P	W	P	E	E	A	N	R	T
Query Conservation																				.	.	.	.	.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		R	R	S	W	L	R	P	V	E	D	A	M	F	R	W	Y	A	A	H	P	P	K	Q	L	L	D	W	M	R	E	S	D	V	I	V	F	E	S	G	I	A	V	A	F	I	E	L	A	K	R	V	N	P	A	A	K	L	V	Y	R	A	S	D	G	L	S	T	I	N	V	A	S	Y	I	E	R	E	F	D	R
Template Known Secondary structure		S		G	G	G																											S						S	S	G	G	G	G	G									T	T	S							S	S		T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	T	G	H	L	A	M	Y	H	F	S	P	T	E	T	S	R	Q	N	L	L	R	E	N	V	A	D	S	R	I	F	I	T	G	N	T	V	I	D	A	L	L	W	V	R	D	Q	V	M	S	S	D	K	L	R	S	E	L	A	A	N	Y	P	F	I	D	P	D	K	K	M	I	L	V	T	G	H	R	R	E
Query Conservation
Alig confidence						.													.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation						.													.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		V	A	P	T	.	L	D	V	I	A	L	V	S	P	A	M	A	.	.	.	.	A	E	V	V	S	R	D	N	V	F	H	V	G	H	G	V	D	H	N	L	D	Q	L	G	D	P	S	P	Y	A	E	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	H	A	V	A	V	G
Template Known Secondary structure			G	G	G	.		S					S		G	G	G	G	.	.	.	.	G	G		S		S	T	T								B		T	T					T		S		S			S	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure						.													.	.	.	.																																	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		175	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190					.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.																					.	.	.	.	.	.	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290
Predicted Secondary structure																																																																												.	.	.	.	.	.
Query SS confidence																																																																												.	.	.	.	.	.
Query Sequence		S	F	G	R	G	F	E	E	I	C	H	A	L	A	D	I	A	T	T	H	Q	D	I	Q	I	V	Y	P	V	H	L	N	P	N	V	R	E	P	V	N	R	I	L	G	H	V	K	N	V	I	L	I	D	P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	T	D	S	.	.	.	.	.	.
Query Conservation																																																																												.	.	.	.	.	.
Alig confidence																		.	.	.	.														.	.	.	.	.	.	.																																			.	.	.	.	.	.
Template Conservation																		.	.	.	.														.	.	.	.	.	.	.
Template Sequence		S	M	L	F	D	P	E	F	F	V	V	A	S	K	A	F	.	.	.	.	P	Q	V	T	F	H	V	I	G	S	G	M	G	.	.	.	.	.	.	.	R	H	P	G	Y	G	D	N	V	I	V	Y	G	E	M	K	H	A	Q	T	I	G	Y	I	K	H	A	R	F	G	I	A	P	Y	A	S	E	Q	V	P
Template Known Secondary structure			T	T	B													.	.	.	.	T	T							S		S	S		.	.	.	.	.	.	.			T	T			T	T																		T		S						B	S		S		S
Template Predicted Secondary structure																		.	.	.	.														.	.	.	.	.	.	.
Template SS confidence
		230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.					.	.	.	.	250	.	.	.	.	.	.	.	.								.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
								291	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.
Query SS confidence		.	.	.	.	.	.
Query Sequence		.	.	.	.	.	.	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	R	L	V	G	T	D	K	Q	R	I	V	E	E	V	T	R	L	L	K	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y	G	D	G	Q	A	C	S	R
Query Conservation		.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.																									.	.	.	.																															.	.	.	.	.
Template Conservation																																.	.	.	.																															.	.	.	.	.
Template Sequence		V	Y	L	A	D	S	S	M	K	L	L	Q	Y	D	F	F	G	L	P	A	V	C	P	N	A	V	V	G	P	Y	.	.	.	.	K	S	R	F	G	Y	T	P	G	N	A	D	S	V	I	A	A	I	T	Q	A	L	E	A	P	R	V	R	Y	R	.	.	.	.	.	Q	C	L	N	W	S	D	T	T	D	R
Template Known Secondary structure		T	T														T	T							G	G	G	T		S		.	.	.	.	S	S						T	T																					S	.	.	.	.	.				B
Template Predicted Secondary structure																																.	.	.	.																															.	.	.	.	.
Template SS confidence
		299	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.					.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.						.	360	.	.	.	.	.	.	.	.	.
		365	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		I	L	E
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	L	D
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		370	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions