Return to main results Retrieve Phyre Job Id

Job DescriptionP27828
Confidence100.00%DateThu Jan 5 11:44:04 GMT 2012
Rank11Aligned Residues334
% Identity16%Templatec2gejA_
PDB info PDB header:transferaseChain: A: PDB Molecule:phosphatidylinositol mannosyltransferase (pima); PDBTitle: crystal structure of phosphatidylinositol mannosyltransferase (pima)2 from mycobacterium smegmatis in complex with gdp-man
Resolution2.60 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   1........10.... .....20.........30.........40.........50.........60.........70.....
Predicted Secondary structure 





.....




















Query SS confidence 













. . . . .




























































Query Sequence  MKVLTVFGTRPEAI. . . . . KMAPLVHALAKDPFFEAKVCVTAQHREMLDQVLKLFSIVPDYDLNIMQPGQGLTEITCRIL
Query Conservation 



 
 
      .....  
 
   
    
 

 

                                         
Alig confidence 













.....











.










...............





















Template Conservation 



 
        

       
   
   .
  
 
     ...............                      
Template Sequence  MRIGMVCPYSFDVPGGVQSHVLQLAEVLRDA. GHEVSVLAPAS. . . . . . . . . . . . . . . PHVKLPDYVVSGGKAVFGPATH
Template Known Secondary structure 


S
TTS

T.T
S

...............TTS


TT






Template Predicted Secondary structure 










.




...............












Template SS confidence 















































































   1........10.........20.........30. ........40.. .......50.........60....
 
   76...80.........90.........100.........110.........120.........130.........140.........150.....
Predicted Secondary structure 



























Query SS confidence 















































































Query Sequence  EGLKPILAEFKPDVVLVHGDTTTTLATSLAAFYQRIPVGHVEAGLRTGDLYSPWPEEANRTLTGHLAMYHFSPTETSRQN
Query Conservation        
    

 
                                                   
      
      
Alig confidence 


















.












































.













Template Conservation    
   
     


    .                                             .    
  
      
Template Sequence  RKVKKWIAEGDFDVLHIHE. PNAPSLSMLALQAAEGPIVATFHTSTTKSLTLSVFQGILRPYHEK. IIGRIAVSDLARRW
Template Known Secondary structure 

S
.

SSSSS




STTT.
SSS
Template Predicted Secondary structure 





.















.


Template SS confidence 















































































   77..80.........90..... ....100.........110.........120.........130.........140 .........150....
 
   156...160.........170.........180.........190.........200.........210.........220.........230.....
Predicted Secondary structure 

















































Query SS confidence 















































































Query Sequence  LLRENVADSRIFITGNTVIDALLWVRDQVMSSDKLRSELAANYPFIDPDKKMILVTGHRRESFGRGFEEICHALADIATT
Query Conservation 
                                                    
    
     
    
  
       
Alig confidence 


























.................



































Template Conservation                             .................         
          
    
          
Template Sequence  QMEALGSDAVEIPNGVDVASFADAPLL. . . . . . . . . . . . . . . . . DGYPREGRTVLFLGRYDEPRKGMAVLLAALPKLVAR
Template Known Secondary structure  SS





B
T



.................TT
S
TT
S
TTSGGG
Template Predicted Secondary structure 













.................
















Template SS confidence 















































































   155....160.........170.........180. ........190.........200.........210.......
 
   236...240.........250.........260.........270.........280....... ..290.........300.........
Predicted Secondary structure 























......








Query SS confidence 



















































. . . . . .





















Query Sequence  HQDIQIVYPVHLNPNVREPVNRILGHVKNVILIDPQEYLPFVWLMNHAWLIL. . . . . . TDSGGIQEEAPSLGKPVLVMRD
Query Conservation                               
                      ......        



 
 


    
Alig confidence 














..


































......





















Template Conservation                 ..            
   
                        
       

 
 
 


    
Template Sequence  FPDVEILIVGRGDED. . ELREQAGDLAGHLRFLGQVDDATKASAMRSADVYCAPHLGGESFGIVLVEAMAAGTAVVASDL
Template Known Secondary structure 
TT
S


..TGGGGGG

S

T
S


S

SS
T



Template Predicted Secondary structure 







..



























Template SS confidence 















































































   218.220.........230.. .......240.........250.........260.........270.........280.........290.....
 
   310.........320..... ....330.........340.........350.........360.........370.
Predicted Secondary structure 







.









Query SS confidence 















.













































Query Sequence  TTERPEAVTAGTVRLV. GTDKQRIVEEVTRLLKDENEYQAMSRAHNPYGDGQACSRILEALKN
Query Conservation   
          
   .  
   

 

  

 
      
           
  

   
  
Alig confidence 















.













































Template Conservation      
 
     
 
    
   
   
  

            
      

          
Template Sequence  DAFRRVLADGDAGRLVPVDDADGMAAALIGILEDDQLRAGYVARASERVHRYDWSVVSAQIMR
Template Known Secondary structure  GGGTSS

TT

GGGGB
Template Predicted Secondary structure 













Template SS confidence 






























































   296...300.........310.........320.........330.........340.........350........
 
Download:Text version FASTA pairwise alignment 3D Model in PDB format

View in Jmol

Send structure to FirstGlance for more viewing options


Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions