Job Description P27828 Confidence 28.35% Date Thu Jan 5 11:44:04 GMT 2012 Rank 397 Aligned Residues 87 % Identity 18% Template c1toaA_ PDB info PDB header:binding protein Chain: A: PDB Molecule:protein (periplasmic binding protein troa); PDBTitle: periplasmic zinc binding protein troa from treponema pallidum Resolution 1.80 Å

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		270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.							.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.							.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																				.	.	.	.	.	.																																				.	.	.	.	.	.
Query SS confidence																				.	.	.	.	.	.																																				.	.	.	.	.	.
Query Sequence		P	Q	E	Y	L	P	F	V	W	L	M	N	H	A	W	L	I	L	.	.	.	.	.	.	T	D	S	G	G	I	Q	E	E	A	P	S	L	G	K	P	V	L	V	M	R	D	T	T	E	R	P	E	A	V	T	A	G	T	V	.	.	.	.	.	.	R	L	V	G	T	D	K	Q	R	I	V	E	E	V	T
Query Conservation																				.	.	.	.	.	.																																				.	.	.	.	.	.
Alig confidence																				.	.	.	.	.	.																																				.	.	.	.	.	.
Template Conservation
Template Sequence		Y	T	A	T	A	G	D	V	E	W	L	G	N	A	D	L	I	L	Y	N	G	L	H	L	E	T	K	M	G	E	V	F	S	K	L	R	G	S	R	L	V	V	A	V	S	E	T	I	P	V	S	Q	R	L	S	L	E	E	A	E	F	D	P	H	V	W	F	D	V	K	L	W	S	Y	S	V	K	A	V	Y
Template Known Secondary structure																S							T	T		S	T	T									T	T	S	S					G	G	G	G	S		G	G	G	S		B	S	T	T	S		B				G	G	G	S
Template Predicted Secondary structure
Template SS confidence
		70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.
		338	.	340	.			.	.	.	.	.	.	.	.	350	.	.	.	.	.	.
Predicted Secondary structure						.	.
Query SS confidence						.	.
Query Sequence		R	L	L	K	.	.	D	E	N	E	Y	Q	A	M	S	R	A	H	N	P	Y
Query Conservation						.	.
Alig confidence						.	.
Template Conservation
Template Sequence		E	S	L	C	K	L	L	P	G	K	T	R	E	F	T	Q	R	Y	Q	A	Y
Template Known Secondary structure									G	G	G
Template Predicted Secondary structure
Template SS confidence
		150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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