Job Description P0A717 Confidence 63.22% Date Thu Jan 5 11:04:30 GMT 2012 Rank 100 Aligned Residues 152 % Identity 13% Template c3uagA_ PDB info PDB header:ligase Chain: A: PDB Molecule:protein (udp-n-acetylmuramoyl-l-alanine:d- PDBTitle: udp-n-acetylmuramoyl-l-alanine:d-glutamate ligase Resolution 1.77 Å

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		12	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.			.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.
Query SS confidence																						.	.
Query Sequence		T	P	E	L	A	Q	R	I	A	N	R	L	Y	T	S	L	G	D	A	A	.	.	V	G	R	F	S	D	G	E	V	S	V	Q	I	N	E	N	V	R	G	G	D	I	F	I	I	Q	S	T	C	A	P	T	N	D	N	L	M	E	L	V	V	M	V	D	A	L	R	R	A	S	A	G	R	I	T	A	V	I
Query Conservation																						.	.
Alig confidence																						.	.																				.									.	.	.	.																.	.
Template Conservation																																											.									.	.	.	.																.	.
Template Sequence		N	A	L	A	A	L	A	L	A	D	A	A	G	L	P	R	A	S	S	L	K	A	L	T	T	F	T	G	L	P	H	R	F	E	V	V	L	E	H	N	G	.	V	R	W	I	N	D	S	K	.	.	.	.	A	T	N	V	G	S	T	E	A	A	L	N	G	L	H	.	.	V	D	G	T	L	H	L	L	L
Template Known Secondary structure													T	T																	T	T	S	S							T	T	.							T	T	.	.	.	.			S									T	T			.	.		S	S
Template Predicted Secondary structure																																											.									.	.	.	.																.	.
Template SS confidence
		271	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.		.	.	.	.	.	.	.	.					320	.	.	.	.	.	.	.	.	.	330	.	.	.	.			.	.	.	.	.	340	.	.	.
		90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.		160	.	.	.	.	.	.	.	.
Predicted Secondary structure																																																																								.
Query SS confidence																																																																								.
Query Sequence		P	Y	F	G	Y	A	R	Q	D	R	R	V	R	S	A	R	V	P	I	T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	V	D	L	H	A	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	.	N	L	D	N	P	I	V	V	S
Query Conservation																																																																								.
Alig confidence			.	.															.					.	.	.	.	.	.	.	.	.	.																																							.
Template Conservation			.	.															.					.	.	.	.	.	.	.	.	.	.
Template Sequence		G	.	.	G	D	G	K	S	A	D	F	S	P	L	A	R	Y	.	L	N	G	D	.	.	.	.	.	.	.	.	.	.	N	V	R	L	Y	C	F	G	R	D	G	A	Q	L	A	A	L	R	P	E	V	A	E	Q	T	E	T	M	E	Q	A	M	R	L	L	A	P	R	V	Q	P	G	D	M	V	L	L	S
Template Known Secondary structure			.	.	S	B		T	T				G	G	G	G	G	G	.	S		S	T	.	.	.	.	.	.	.	.	.	.	T							S	T	T						T	T	S	G	G	G					S	S									G	G	G			T	T
Template Predicted Secondary structure			.	.															.					.	.	.	.	.	.	.	.	.	.
Template SS confidence
		344			.	.	.	.	.	350	.	.	.	.	.	.	.	.		.	360	.	.											.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410
		169	170	.	.	.	.	.	.	.	.	.	180	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	I	G	G	V	V	R	A	R	A	I	A	K	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		P	A	C	A	S	L	D	Q	F	K	N	F	E	Q	R
Template Known Secondary structure			S	S	B	S	T	T	T	S	S	S
Template Predicted Secondary structure
Template SS confidence
		411	.	.	.	.	.	.	.	.	420	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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