Job Description P0A717 Confidence 32.16% Date Thu Jan 5 11:04:30 GMT 2012 Rank 189 Aligned Residues 166 % Identity 15% Template c3snrA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:extracellular ligand-binding receptor; PDBTitle: rpd_1889 protein, an extracellular ligand-binding receptor from2 rhodopseudomonas palustris. Resolution 1.49 Å

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		109	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.			.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																					.	.																																														.
Query SS confidence																					.	.																																														.
Query Sequence		T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	.	.	V	D	L	H	A	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	S	P	D	I	G	.	G	V	V	R	A	R	A	I	A	K	L	L	N
Query Conservation																					.	.																																														.
Alig confidence																					.	.																																														.
Template Conservation
Template Sequence		P	S	V	A	I	S	N	V	A	N	E	A	Q	I	P	H	I	A	L	A	P	L	P	I	T	P	E	R	A	K	W	S	V	V	X	P	Q	P	I	P	I	X	G	K	V	L	Y	E	H	X	K	K	N	N	V	K	T	V	G	Y	I	G	Y	S	D	S	Y	G	D	L	W	F	N	D	L	K	K	Q	G	E
Template Known Secondary structure														T						S	S						T	T	T	T	T	T					S																	T	T										S	S
Template Predicted Secondary structure
Template SS confidence
		104	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.			.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.
Predicted Secondary structure																													.	.
Query SS confidence																													.	.
Query Sequence		D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	.	.	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F	A	Y	A	T	H	P	I	F	S	G	N	A	A	N	N	L	R	N
Query Conservation																													.	.
Alig confidence																													.	.								.	.	.																				.
Template Conservation																																						.	.	.																				.
Template Sequence		A	X	G	L	K	I	V	G	E	E	R	F	A	R	P	D	T	S	V	A	G	Q	A	L	K	L	V	A	A	N	P	D	A	I	L	V	.	.	.	G	A	S	G	T	A	A	A	L	P	Q	T	T	L	R	E	R	G	Y	.	N	G	L	I	Y	Q	T	H	G	A	A	S	X	D	F	I	R	I	A	G	K
Template Known Secondary structure			T	T											T	T		S															S					.	.	.																	T	T		.		S						G	G	G		S								G	G
Template Predicted Secondary structure																																						.	.	.																				.
Template SS confidence
		184	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.				220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.		.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
		264	.	.	.	.	.	270	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	V	I	D	E	V	V	V	C	D	T	I	P	L	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		S	A	E	G	V	L	X	A	S	G	P	V	X	D	P
Template Known Secondary structure		G	G	T	T							G	G	G		S
Template Predicted Secondary structure
Template SS confidence
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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