Job Description P0A717 Confidence 28.55% Date Thu Jan 5 11:04:30 GMT 2012 Rank 207 Aligned Residues 158 % Identity 17% Template c3pdiB_ PDB info PDB header:protein binding Chain: B: PDB Molecule:nitrogenase mofe cofactor biosynthesis protein nifn; PDBTitle: precursor bound nifen Resolution 2.40 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.																			130	.	.	.	.	.	.	.	.	.	140	.	.					.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
Predicted Secondary structure																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query SS confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Query Sequence		A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	V	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	L	H	A	E	Q	I	Q	G	F	F	D	V	P	.	.	.	.	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V
Query Conservation																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Alig confidence																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.														.	.	.	.
Template Conservation
Template Sequence		L	E	Y	I	A	E	S	I	E	S	F	G	L	R	P	L	L	I	P	D	L	S	G	S	L	D	G	H	L	D	E	N	R	F	N	A	L	T	T	G	G	L	S	V	A	E	L	A	T	A	G	Q	S	V	A	T	L	V	V	G	Q	S	L	A	G	A	A	D	A	L	A	E	R	T	G	V	P	D	R	R
Template Known Secondary structure											T	T	T							S						S	S	S				S	S			T	T			S		S	B						G	G	G	S	S		S						S	G	G	G											S
Template Predicted Secondary structure
Template SS confidence
		185	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.
		168	.	170	.					.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure						.	.	.	.
Query SS confidence						.	.	.	.
Query Sequence		S	P	D	I	.	.	.	.	G	G	V	V	R	A	R	A	I	A	K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R
Query Conservation						.	.	.	.
Alig confidence						.	.	.	.																															.																				.	.	.	.
Template Conservation																																								.																				.	.	.	.
Template Sequence		F	G	M	L	Y	G	L	D	A	V	D	A	W	L	M	A	L	A	E	I	S	G	N	P	V	P	D	R	Y	K	R	Q	R	A	Q	L	Q	D	.	A	M	L	D	T	H	F	M	L	S	S	A	R	T	A	I	A	A	D	.	.	.	.	P	D	L	L	L	G	F	D	A	L	L	R	S	M	G	A	H	T
Template Known Secondary structure					S																		S	S																.										T	T									.	.	.	.													T	T	T
Template Predicted Secondary structure																																								.																				.	.	.	.
Template SS confidence
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.		.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.					.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.
		244	.	.	.	.	.	250	.	.	.	.															.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		V	F	A	Y	A	T	H	P	I	F	S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	N	A	A	N	N	L	R	N	S	V	I	D	E	V	V	V	C
Query Conservation													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		V	A	A	V	V	P	A	R	A	A	A	L	V	D	S	P	L	P	S	V	R	V	G	D	L	E	D	L	E	H	A	A	R	A	G	Q	A	Q	L	V	I	G	N
Template Known Secondary structure							S	S			S			T	T	T	T	S	S					S													T		S
Template Predicted Secondary structure
Template SS confidence
		340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions