Job Description P0A717 Confidence 25.21% Date Thu Jan 5 11:04:30 GMT 2012 Rank 223 Aligned Residues 149 % Identity 8% Template c3o1hB_ PDB info PDB header:signaling protein Chain: B: PDB Molecule:periplasmic protein tort; PDBTitle: crystal structure of the tors sensor domain - tort complex in the2 presence of tmao Resolution 3.10 Å

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		143	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.					.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.
Predicted Secondary structure																											.	.	.	.
Query SS confidence																											.	.	.	.
Query Sequence		V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	.	.	.	.	S	P	D	I	G	G	V	V	R	A	R	A	I	A	K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L
Query Conservation																											.	.	.	.
Alig confidence																											.	.	.	.																																																			.
Template Conservation																																																																																	.
Template Sequence		V	D	W	Y	W	M	G	Y	E	A	G	K	Y	L	A	E	R	H	P	K	G	S	G	K	T	N	I	A	L	L	L	G	P	R	T	K	P	V	T	T	G	F	Y	E	A	I	K	N	S	D	I	H	I	V	D	S	F	W	A	D	N	D	K	E	L	Q	R	N	L	V	Q	R	V	I	D	M	G	N	I	.
Template Known Secondary structure				T															S		T	T	S																									S	S	S	S											S															T				.
Template Predicted Secondary structure																																																																																	.
Template SS confidence
		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		219	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F	A	Y	A	T	H	P	I	F	S	G	N	A	A	N	N	L	R	N	S	V	I	D	E	V	V	V	C	D	T	I	P	L	S	D	E	I	K	S	L	P	N	V	R	T	L	T	L	S	G	M	L	A	E
Query Conservation
Alig confidence		.																																		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.																																		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	D	Y	I	V	G	S	A	V	A	I	E	A	A	I	S	E	L	R	S	A	D	K	T	H	D	I	G	L	V	S	V	Y	L	.	S	H	G	V	Y	R	G	L	L	R	N	K	V	L	F	A	P	T	D	K	M	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Q	Q	G	R	L	S	V	M
Template Known Secondary structure		.	S																			T	S		T	T	T	S					S	S		.		T	T							T	T	S			B								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure		.																																		.																							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
			221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.		.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.																.	.	.	.	280	.	.	.
		299	300	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	I	R	R	I	S	N	E	E	S	I
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Q	A	A	H	Y	L	R	H	Q	P	Y
Template Known Secondary structure								T	T
Template Predicted Secondary structure
Template SS confidence
		284	.	.	.	.	.	290	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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