Job Description P0A717 Confidence 20.75% Date Thu Jan 5 11:04:30 GMT 2012 Rank 247 Aligned Residues 112 % Identity 17% Template c3dufD_ PDB info PDB header:oxidoreductase/transferase Chain: D: PDB Molecule:pyruvate dehydrogenase e1 component subunit beta; PDBTitle: snapshots of catalysis in the e1 subunit of the pyruvate2 dehydrogenase multi-enzyme complex Resolution 2.50 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.											.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.				.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.	.	.	.	.																										.	.	.
Query SS confidence																									.	.	.	.	.	.	.	.	.	.																										.	.	.
Query Sequence		M	P	D	M	K	L	F	A	G	N	A	T	P	E	L	A	Q	R	I	A	N	R	L	.	.	.	.	.	.	.	.	.	.	Y	T	S	L	G	D	A	A	V	G	R	F	S	D	G	E	V	S	V	Q	I	N	E	N	V	.	.	.	R	G	G	D	I	F	I	I	Q	S	T	C	A	P	T	N	D	N	L
Query Conservation																									.	.	.	.	.	.	.	.	.	.																										.	.	.
Alig confidence																									.	.	.	.	.	.	.	.	.	.																										.	.	.												.	.	.	.	.
Template Conservation																																																																										.	.	.	.	.
Template Sequence		Q	P	G	L	K	V	V	I	P	S	T	P	Y	D	A	K	G	L	L	I	S	A	I	R	D	N	D	P	V	I	F	L	E	H	L	K	L	Y	R	S	F	R	Q	E	V	P	E	G	E	Y	T	I	P	I	G	K	A	D	I	K	R	E	G	K	D	I	T	I	I	A	Y	G	.	.	.	.	.	A	M	V
Template Known Secondary structure		S	T	T								S														S	S	S								T	T	T	T	T	S							S	S						T	T									S	S							T	.	.	.	.	.	T
Template Predicted Secondary structure																																																																										.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210						.	.	.
		68	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		M	E	L	V	V	M	V	D	A	L	R	R	A	S	A	G	R	I	T	A	V	I	P	Y	F	G	Y	A	R	Q	D	R	R	V	R	S	A	R	V	P	I	T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	V	D	L	H	A
Query Conservation
Alig confidence																	.												.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Conservation																	.												.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template Sequence		H	E	S	L	K	A	A	A	E	L	E	K	E	G	I	.	S	A	E	V	V	D	L	R	T	V	Q	.	.	.	.	.	.	.	.	.	.	.	.	P	L	D	I	E	T	I	I	G	S	V	E	K	.	.	T	G	R	A	I	V	V	Q	E	A	Q
Template Known Secondary structure													T	T	T		.								S				.	.	.	.	.	.	.	.	.	.	.	.	S													.	.		S
Template Predicted Secondary structure																	.												.	.	.	.	.	.	.	.	.	.	.	.														.	.
Template SS confidence
		214	.	.	.	.	.	220	.	.	.	.	.	.	.	.		.	230	.	.	.	.	.	.	.	.	.													240	.	.	.	.	.	.	.	.	.	250	.	.			.	.	.	.	.	.	.	260	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions