Job Description P0A717 Confidence 71.19% Date Thu Jan 5 11:04:30 GMT 2012 Rank 87 Aligned Residues 124 % Identity 13% Template c3donA_ PDB info PDB header:oxidoreductase Chain: A: PDB Molecule:shikimate dehydrogenase; PDBTitle: crystal structure of shikimate dehydrogenase from staphylococcus2 epidermidis Resolution 2.10 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.	.
Predicted Secondary structure																																																																								.	.	.	.
Query SS confidence																																																																								.	.	.	.
Query Sequence		P	I	T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	V	D	L	H	A	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	S	P	D	I	G	G	V	V	R	.	.	.	.	A	R	A	I	A	K
Query Conservation																																																																								.	.	.	.
Alig confidence																							.	.	.	.	.	.	.	.	.	.										.	.	.																												.	.	.	.
Template Conservation																							.	.	.	.	.	.	.	.	.	.										.	.	.
Template Sequence		S	L	S	P	L	M	H	H	A	N	F	Q	S	L	N	L	E	N	T	Y	E	.	.	.	.	.	.	.	.	.	.	A	I	N	V	P	V	N	Q	F	.	.	.	Q	D	I	K	K	I	I	S	E	K	S	I	D	G	F	N	V	T	I	P	H	K	E	R	I	I	P	Y	L	D	D	I	N	E	Q	A	K
Template Known Secondary structure															T	T							.	.	.	.	.	.	.	.	.	.						G	G	G	G	.	.	.	G	G								T	T		S						T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure																							.	.	.	.	.	.	.	.	.	.										.	.	.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.											.	.	.	.	.	.	40	.	.				.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.								.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																							.	.	.	.	.	.	.
Query SS confidence																							.	.	.	.	.	.	.
Query Sequence		L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	.	.	.	.	.	.	.	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F	A	Y
Query Conservation																							.	.	.	.	.	.	.
Alig confidence																							.	.	.	.	.	.	.																	.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		S	V	G	A	V	N	T	V	L	V	K	D	G	K	W	I	G	Y	N	T	D	G	I	G	Y	V	N	G	L	K	Q	I	Y	E	G	I	E	D	A	Y	I	L	I	L	.	.	.	.	G	A	G	G	A	S	K	G	I	A	N	E	L	Y	K	I	V	R	P	T	L	T	V	A
Template Known Secondary structure				T									T	T																				S	T	T	G	G	G							.	.	.	.			S												T	T			S
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.					.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions