Job Description P0A717 Confidence 66.36% Date Thu Jan 5 11:04:30 GMT 2012 Rank 94 Aligned Residues 119 % Identity 13% Template c3dmdA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:signal recognition particle receptor; PDBTitle: structures and conformations in solution of the signal recognition2 particle receptor from the archaeon pyrococcus furiosus Resolution 2.21 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.				.	.	.
Predicted Secondary structure																						.	.	.																																																				.	.	.
Query SS confidence																						.	.	.																																																				.	.	.
Query Sequence		L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	S	P	D	I	.	.	.	G	G	V	V	R	A	R	A	I	A	K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	.	.	.	I	D	T
Query Conservation																						.	.	.																																																				.	.	.
Alig confidence												.										.	.	.															.																																					.	.	.
Template Conservation												.																											.
Template Sequence		L	A	N	W	L	K	N	H	G	F	.	S	V	V	I	A	A	S	D	T	F	R	A	G	A	I	E	Q	L	E	E	H	A	K	R	I	G	.	V	K	V	I	K	H	S	Y	G	A	D	P	A	A	V	A	Y	D	A	I	Q	H	A	K	A	R	G	I	D	V	V	L	I	D	T	A	G	R	S	E	T	N
Template Known Secondary structure									T	T		.									T	T															T	T	.							S	T	T																		T		S								S	S			S	S
Template Predicted Secondary structure												.																											.
Template SS confidence
		143	.	.	.	.	.	.	150	.	.		.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.		.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
		226	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.				.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.
Predicted Secondary structure																												.	.	.
Query SS confidence																												.	.	.
Query Sequence		G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F	A	Y	A	T	H	P	.	.	.	I	F	S	G	N	A	A	N	N	L	R	N	S	V	I	D	E	V	V	V	C
Query Conservation																												.	.	.
Alig confidence																												.	.	.
Template Conservation
Template Sequence		R	N	L	M	D	E	M	K	K	I	A	R	V	T	K	P	N	L	V	I	F	V	G	D	A	L	A	G	N	A	I	V	E	Q	A	R	Q	F	N	E	A	V	K	I	D	G	I	I	L	T
Template Known Secondary structure		S																S								T	T		T	T	T												S
Template Predicted Secondary structure
Template SS confidence
		221	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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