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Job DescriptionP0A717
Confidence100.00%DateThu Jan 5 11:04:30 GMT 2012
Rank3Aligned Residues293
% Identity63%Templatec3dahB_
PDB info PDB header:transferaseChain: B: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: 2.3 a crystal structure of ribose-phosphate pyrophosphokinase from2 burkholderia pseudomallei
Resolution2.30 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   3......10.........20.........30.........40.........50.........60.........70.........80..
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Query Sequence  DMKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASA
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Template Sequence  GLMVFTGNANPALAQEVVKILGIPLGKAMVSRFSDGEIQVEIQENVRGKDVFVLQSTCAPTNDNLMELMIMVDALKRASA
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   6...10.........20.........30.........40.........50.........60.........70.........80.....
 
   83......90.........100.........110.........120.........130.........140.........150.........160..
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Query Sequence  GRITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLD
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Template Sequence  GRITAAIPYFGYARQDRRPRSARVAISAKVVANMLEIAGVERIITMDLHADQIQGFFDIPVDNIYATPILLGDLRKQNYP
Template Known Secondary structure  SSS
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   86...90.........100.........110.........120.........130.........140.........150.........160.....
 
   163......170.........180.........190.........200.........210.........220.........230.........240..
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Query Sequence  NPIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAK
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Template Sequence  DLLVVSPDVGGVVRARALAKQLN. CDLA. . . . . . . . . . . . . . . . . IGEVEGRTCVIMDDMVDTAGTLCKAAQVLKERGAK
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   166...170.........180........ .190.. .......200.........210.........220.......
 
   243......250.........260.........270.........280.........290.........300.........310...
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Query Sequence  RVFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLSDEIKSLPNVRTLTLSGMLAEAIRRISNEESISAMF
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Template Sequence  QVFAYATHPVLSGGAADRIAASALDELVVTDTIPLSAESLACPKIRALSSAGLLAETFSRIRRGDSVMSLF
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   245....250.........260.........270.........280.........290.........300.........310.....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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