Job Description P0A717 Confidence 29.87% Date Thu Jan 5 11:04:30 GMT 2012 Rank 201 Aligned Residues 85 % Identity 20% Template c2wc1A_ PDB info PDB header:electron transport Chain: A: PDB Molecule:flavodoxin; PDBTitle: three-dimensional structure of the nitrogen fixation2 flavodoxin (niff) from rhodobacter capsulatus at 2.2 a Resolution 2.17 Å

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		1	.	.	.	.	.	.	.	.	10	.				.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.																	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.
Predicted Secondary structure													.	.	.														.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query SS confidence													.	.	.														.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Query Sequence		M	P	D	M	K	L	F	A	G	N	A	.	.	.	T	P	E	L	A	Q	R	I	A	N	R	L	Y	.	.	.	.	T	S	L	G	D	A	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	G	R	F	S	D	G	E	V	S	V	Q	I	N	E	N	.	.	.	.	.	.	.	.	.	.
Query Conservation													.	.	.														.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Alig confidence													.	.	.														.	.	.	.								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		M	A	K	I	G	L	F	F	G	S	D	T	G	T	T	R	K	I	A	K	Q	I	K	D	M	F	D	D	E	V	M	A	K	P	L	N	V	N	R	A	D	V	A	D	F	M	A	Y	D	F	L	I	L	G	T	P	T	L	G	D	G	Q	L	P	G	L	S	A	N	A	A	S	E	S	W	E	E	F	L	P
Template Known Secondary structure				S								S	S	S											T	T	S		T	T	T	B						G	G	G										S									B	T	T	T	B		S	S	G	G	G	T		S	S							G	G
Template Predicted Secondary structure
Template SS confidence
		1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80
								48	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.			.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.																	.	.
Query SS confidence		.	.	.	.	.	.																	.	.
Query Sequence		.	.	.	.	.	.	V	R	G	G	D	I	F	I	I	Q	S	T	C	A	P	T	.	.	N	D	N	L	M	E	L	V	V	M	V	D	A	L	R	R	A	S	A	G	R	I
Query Conservation		.	.	.	.	.	.																	.	.
Alig confidence		.	.	.	.	.	.																	.	.
Template Conservation
Template Sequence		R	I	A	D	Q	D	F	S	G	K	T	I	A	L	F	G	L	G	D	Q	V	T	Y	P	L	E	F	V	N	A	L	F	F	L	H	E	F	F	S	D	R	G	A	N	V	V
Template Known Secondary structure		G	G	T	T				T	T											T	T	T		T	T	S	T	T	T											T	T	T
Template Predicted Secondary structure
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions