 |
Job Description | P0A717 | Confidence | 31.47% | Date | Thu Jan 5 11:04:30 GMT 2012 |
Rank | 192 | Aligned Residues | 100 |
% Identity | 11% | Template | c2vlbC_ |
PDB info |
PDB header:lyase | Chain: C: PDB Molecule:arylmalonate decarboxylase; |
PDBTitle: structure of unliganded arylmalonate decarboxylase
|
Resolution | 1.92 Å |
|
 |
  |   |
73 | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
M | V | D | A | L | R | R | A | S | A | G | R | I | T | A | V | I | P | Y | F | G | Y | A | R | Q | D | R | R | V | R | S | A | R | V | P | I | T | A | K | V | V | A | D | F | L | S | S | V | G | V | D | R | V | L | T | V | D | L | H | A | E | Q | I | Q | G | F | F | D | V | P | V | D | N | V | F | G | S | P | I | L |
Query Conservation |   |
  |   |   |
|
|
|   |   |
|
|   |   |
|   |   |
|
|
|
|
|   |
|
|
|
|
|
|   |   |   |   |
|   |   |   |
|
|   |
|   |
|
|   |
|
|   |   |   |
|   |
|   |
|
|
|
|
|   |
|   |   |   |   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |
|
|   |   |   |   |   |   |
|
|   |
|
|
|
|   |   |   |   |   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
Template Sequence |   |
V | L | N | G | L | R | A | L | G | V | R | R | V | A | L | A | T | A | Y | I | D | D | V | N | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
R | L | A | A | F | L | A | E | E | S | L | V | P | T | G | C | R | S | L | G | I | T | G | V | E | A | M | A | R | V | D | T | A | T | L | V | D | L | C | V | R |
Template Known Secondary structure |   |
 |  |  |  |  |  |  |  | T |
|
|  |  |  |  |  |  | S |
|
|  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |
|
| S |
|
|  |  |  |  | T | T |
|
|  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  | . | . | . | . | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
108 | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . |
  |
  |   |
153 | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | D | M | L | Q | L | N | L | D | N | P | I | V | V | S | P | D | I | G | G | V | V | R | A | R | A | I | A | K | L | L | N | D | T |
Query Conservation |   |
  |   |   |
|   |   |   |   |   |   |   |   |
|
|
|
|
|
|   |
|   |   |   |
|
|   |   |   |
|   |   |
|
|   |   |
Alig confidence |   |
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   | . |   |   |   |   |
|
|
|
|
|
|   |
|
|   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |
|   |
|
Template Sequence |   |
A | F | E | . |
A | A | P | D | S | D | G | I | L | L | S | C | G | G | L | L | T | L | D | A | I | P | E | V | E | R | R | L | G | V | P |
Template Known Secondary structure |   |
 |  |  | . |  | S | T | T |
| S |  |  |  |  |  |
| S | S | S |
|
| T | T |  |  |  |  |  |  |  |  |  | S | S |
|
Template Predicted Secondary structure |   |
 |  |
| . |
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
174 | . | . | |
. | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|