Job Description P0A717 Confidence 43.40% Date Thu Jan 5 11:04:30 GMT 2012 Rank 154 Aligned Residues 67 % Identity 9% Template c2j37W_ PDB info PDB header:ribosome Chain: W: PDB Molecule:signal recognition particle 54 kda protein PDBTitle: model of mammalian srp bound to 80s rncs Resolution 8.00 Å

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		152	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.				.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220
Predicted Secondary structure																						.	.	.
Query SS confidence																						.	.	.
Query Sequence		L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	S	P	D	I	.	.	.	G	G	V	V	R	A	R	A	I	A	K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D
Query Conservation																						.	.	.
Alig confidence											.											.	.	.															.
Template Conservation											.																												.
Template Sequence		L	A	Y	Y	Y	Q	R	K	G	.	W	K	T	C	L	I	C	A	D	T	F	R	A	G	A	F	D	Q	L	K	Q	N	A	T	K	A	R	.	I	P	F	Y	G	S	Y	T	E	M	D	P	V	I	I	A	S	E	G	V	E	K	F	K	N	E	N	F	E	I	I	I	V	D
Template Known Secondary structure									T	T	.											S	S	S														T	.										S																T	T
Template Predicted Secondary structure											.																												.
Template SS confidence
		121	.	.	.	.	.	.	.	.		130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.		.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions