Job Description P0A717 Confidence 79.90% Date Thu Jan 5 11:04:30 GMT 2012 Rank 78 Aligned Residues 161 % Identity 19% Template c2dx7B_ PDB info PDB header:isomerase Chain: B: PDB Molecule:aspartate racemase; PDBTitle: crystal structure of pyrococcus horikoshii ot3 aspartate racemase2 complex with citric acid Resolution 2.00 Å

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		110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.					.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.
Predicted Secondary structure																			.	.	.	.
Query SS confidence																			.	.	.	.
Query Sequence		A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	.	.	.	.	T	V	D	L	H	A	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	S	P	D	I	G	G	V	V	R	A	R	A	I	A	K	L	L	N
Query Conservation																			.	.	.	.
Alig confidence																			.	.	.	.																					.	.																						.	.
Template Conservation																																											.	.																						.	.
Template Sequence		L	I	W	T	A	K	R	L	E	E	C	G	A	D	F	I	I	M	P	A	N	T	A	H	A	F	V	E	D	I	R	K	A	I	K	I	P	I	I	S	M	.	.	I	E	E	T	A	K	K	V	K	E	L	G	F	K	K	A	G	L	L	A	T	.	.	T	G	T	I	V	S	G	V	Y	E	K	E	F	S
Template Known Secondary structure													T		S							S	G	G	G	G	G									S	S		B				.	.											T	T		S								.	.							T
Template Predicted Secondary structure																																											.	.																						.	.
Template SS confidence
		63	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.			.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.			.	.	.	.	.	130	.	.	.	.	.	.	.	.
		186	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250		.	.	.	.	.	.	.	.	.	260	.	.	.	.
Predicted Secondary structure																																																																			.
Query SS confidence																																																																			.
Query Sequence		D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F	A	Y	A	T	H	.	P	I	F	S	G	N	A	A	N	N	L	R	N	S
Query Conservation																																																																			.
Alig confidence																																.	.	.	.	.	.	.																													.							.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template Sequence		K	Y	G	V	E	I	M	T	P	T	E	D	E	Q	K	D	V	M	R	G	I	Y	E	G	V	K	A	G	N	L	.	.	.	.	.	.	.	K	L	G	R	E	L	L	L	K	T	A	K	I	L	E	E	R	G	A	E	C	I	I	A	G	C	T	E	V	S	V	V	L	K	Q	.	.	.	.	.	.	.	.
Template Known Secondary structure			T	T																								T	T			.	.	.	.	.	.	.																	T	T		S	S					S									G	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.																																				.	.	.	.	.	.	.	.
Template SS confidence
		139	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.								.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.
		265	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	I	D	E	V	V	V	C	D	T	I	P	L	S	D	E	I	K	S	L	P	N	V	R	T	L	T	L	S	G	M	L	A	E	A	I	R	R	I	S	N	E	E
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	D	D	L	K	V	P	L	I	D	P	M	D	V	I	A	E	V	A	V	K	V	A	L	E	K
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	G		S	S																		T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																				204	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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