Job Description P0A717 Confidence 88.33% Date Thu Jan 5 11:04:30 GMT 2012 Rank 71 Aligned Residues 176 % Identity 16% Template c1zuwA_ PDB info PDB header:isomerase Chain: A: PDB Molecule:glutamate racemase 1; PDBTitle: crystal structure of b.subtilis glutamate racemase (race) with d-glu Resolution 1.75 Å

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		91	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.			130	.	.				.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure																																									.	.				.	.	.
Query SS confidence																																									.	.				.	.	.
Query Sequence		Y	F	G	Y	A	R	Q	D	R	R	V	R	S	A	R	V	P	I	T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	V	D	.	.	L	H	A	.	.	.	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I
Query Conservation																																									.	.				.	.	.
Alig confidence														.	.			.																							.	.				.	.	.
Template Conservation														.	.			.
Template Sequence		R	C	P	Y	G	P	R	P	E	E	E	V	.	.	L	Q	.	Y	T	W	E	L	T	N	Y	L	L	E	N	H	H	I	K	M	L	V	I	A	C	N	T	A	T	A	I	A	L	D	D	I	Q	R	S	V	G	I	P	V	V	G	V	I	Q	P	G	A	R	A	A	I	K	V	T	D	N	Q	H	I	G	V
Template Known Secondary structure		G				S	S	S						.	.			.													S			S																						S	S					S													S	S	S
Template Predicted Secondary structure														.	.			.
Template SS confidence
		39	40	.	.	.	.	.	.	.	.	.	50			.	.		.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		V	V	S	P	D	I	G	G	V	V	R	A	R	A	I	A	K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F
Query Conservation
Alig confidence																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		I	G	T	E	N	T	I	K	S	N	A	Y	E	E	A	L	L	A	L	N	P	D	L	K	V	E	N	L	A	C	P	L	L	V	P	F	V	E	S	G	K	F	L	D	Q	T	A	D	.	.	.	.	.	.	.	.	.	.	.	.	.	E	I	V	K	T	S	L	Y	P	L	K	D	T	S	I	D	S	L	I
Template Known Secondary structure										T	T											T	T									T	T						T	S										.	.	.	.	.	.	.	.	.	.	.	.	.													S			S
Template Predicted Secondary structure																																																		.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		116	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.														.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
		246	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	Y	A	T	H	P	I	F	S	G	N	A	A	N	N	L	R	N	S	V	I	D	E	V	V	V	C	D	T	I	P	L	S	D	E	I	K	S	L	P	N	V	R	T	L	T	L	S	G	M	L	A	E	A	I	R	R	I
Query Conservation
Alig confidence																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		L	G	C	T	H	Y	P	I	L	K	E	A	I	Q	R	Y	M	G	E	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	H	V	N	I	I	S	S	G	D	E	T	A	R	E	V	S	T	I
Template Known Secondary structure				S	T	T	G	G	G	G										T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	T	S
Template Predicted Secondary structure																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		183	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.																						.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions