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Job DescriptionP0A717
Confidence100.00%DateThu Jan 5 11:04:30 GMT 2012
Rank6Aligned Residues274
% Identity34%Templatec1u9yD_
PDB info PDB header:transferaseChain: D: PDB Molecule:ribose-phosphate pyrophosphokinase; PDBTitle: crystal structure of phosphoribosyl diphosphate synthase2 from methanocaldococcus jannaschii
Resolution2.65 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   4.....10.........20.........30.........40.........50.........60.........70.........80...
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Query Sequence  MKLFAGNATPELAQRIANRLYTSLGDAAVGRFSDGEVSVQINENVRGGDIFIIQSTCAPTNDNLMELVVMVDALRRASAG
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Template Sequence  MIVVSGSQSQNLAFKVAKLLNTKLTRVEYKRFPDNEIYVRIVDEINDDEAVIINTQK. NQNDAIVETILLCDALRDEGVK
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   1........10.........20.........30.........40.........50....... ..60.........70.........
 
   84.....90.........100.........110.........120.........130.........140.........150.........160...
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Query Sequence  RITAVIPYFGYARQDRRVRSARVPITAKVVADFLSSVGVDRVLTVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDN
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Template Sequence  KITLVAPYLAYARQDKKFNPGE. AISIRALAKIYS. NIVDKLITINPHETHIKDFFTIPFIYGDAVPKLAEYVKD. KLND
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   80.........90.........100. ........110... ......120.........130.........140.........150.. ....
 
   164.....170.........180.........190.........200.........210.........220.........230.........240...
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Query Sequence  PIVVSPDIGGVVRARAIAKLLNDTDMAIIDKRRPRANVSQVMHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKR
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Template Sequence  PIVLAPDKGALEFAKTASKILN. AEYDYLEIAPK. . . . . . . . . . TLDAKDRDVFIVDDIISTGGTMATAVKLLKEQGAKK
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SSGGGT.
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   157..160.........170........ .180......... 190.........200.........210.........220.....
 
   244.....250.........260.........270.........280.........290.........300
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Query Sequence  VFAYATHPIFSGNAANNLRNSVIDEVVVCDTIPLSDEIKSLPNVRTLTLSGMLAEAI
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Template Sequence  IIAACVHPVLIGDALNKLYSAGVEEVVGTDTYLS. . . . . . . . EVSKVSVAEVIVDLL
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   236...240.........250.........260......... 270.........280....
 
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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