Job Description P0A717 Confidence 29.91% Date Thu Jan 5 11:04:30 GMT 2012 Rank 200 Aligned Residues 121 % Identity 14% Template c1npyA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607 Resolution 1.75 Å

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		107	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.		.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.					.	.	.	180	.
Predicted Secondary structure																						.																																																			.	.	.	.
Query SS confidence																						.																																																			.	.	.	.
Query Sequence		P	I	T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	.	T	V	D	L	H	A	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L	D	N	P	I	V	V	S	P	D	I	G	G	V	V	R	.	.	.	.	A	R	A	I	A
Query Conservation																						.																																																			.	.	.	.
Alig confidence																						.							.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																													.	.	.	.
Template Conservation																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		N	F	G	T	T	F	H	N	Y	L	Y	D	K	L	G	L	N	F	I	Y	K	A	F	T	T	Q	D	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	I	E	H	A	I	K	G	V	R	A	L	G	I	R	G	C	A	V	S	M	P	F	K	E	T	C	M	P	F	L	D	E	I	H	P	S	A
Template Known Secondary structure		S														T											S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.												T								T	T		T	T	T	T	G	G	G		S
Template Predicted Secondary structure																													.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		18	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.																	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.							.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
Predicted Secondary structure																									.	.	.	.	.	.
Query SS confidence																									.	.	.	.	.	.
Query Sequence		K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	.	.	.	.	.	.	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A	K	R	V	F	A	Y
Query Conservation																									.	.	.	.	.	.
Alig confidence																									.	.	.	.	.	.																.	.	.	.
Template Conservation																																														.	.	.	.
Template Sequence		Q	A	I	E	S	V	N	T	I	V	N	D	N	G	F	L	R	A	Y	N	T	D	Y	I	A	I	V	K	L	I	E	K	Y	H	L	N	K	N	A	K	V	I	V	H	.	.	.	.	G	S	G	G	M	A	K	A	V	V	A	A	F	K	N	S	G	F	E	K	L	K	I	Y
Template Known Secondary structure			T	T	T									T	T																			T	T			T	T	S						.	.	.	.		S	S	T	T											T	T
Template Predicted Secondary structure																																														.	.	.	.
Template SS confidence
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.					.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions