Return to main results Retrieve Phyre Job Id

Job DescriptionP0A717
Confidence29.91%DateThu Jan 5 11:04:30 GMT 2012
Rank200Aligned Residues121
% Identity14%Templatec1npyA_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:hypothetical shikimate 5-dehydrogenase-like PDBTitle: structure of shikimate 5-dehydrogenase-like protein hi0607
Resolution1.75 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   107..110.........120...... ...130.........140.........150.........160.........170...... ...180.
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Query Sequence  PITAKVVADFLSSVGVDRVL. TVDLHAEQIQGFFDVPVDNVFGSPILLEDMLQLNLDNPIVVSPDIGGVVR. . . . ARAIA
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Template Sequence  NFGTTFHNYLYDKLGLNFIYKAFTTQD. . . . . . . . . . . . . . . . IEHAIKGVRALGIRGCAVSMPFKETCMPFLDEIHPSA
Template Known Secondary structure  ST



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TT
TTTTGGG
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   18.20.........30.........40.... .....50.........60.........70.........80.
 
   182.......190.........200.... .....210.........220.........230.........240.......
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Query Sequence  KLLNDTDMAIIDKRRPRANVSQV. . . . . . MHIIGDVAGRDCVLVDDMIDTGGTLCKAAEALKERGAKRVFAY
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Template Sequence  QAIESVNTIVNDNGFLRAYNTDYIAIVKLIEKYHLNKNAKVIVH. . . . GSGGMAKAVVAAFKNSGFEKLKIY
Template Known Secondary structure  TTT


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   82.......90.........100.........110.........120..... ....130.........140.........
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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