Job Description P0A717 Confidence 100.00% Date Thu Jan 5 11:04:30 GMT 2012 Rank 2 Aligned Residues 300 % Identity 51% Template c1dkrB_ PDB info PDB header:transferase Chain: B: PDB Molecule:phosphoribosyl pyrophosphate synthetase; PDBTitle: crystal structures of bacillus subtilis phosphoribosylpyrophosphate2 synthetase: molecular basis of allosteric inhibition and activation. Resolution 2.30 Å

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	D	M	K	L	F	A	G	N	A	T	P	E	L	A	Q	R	I	A	N	R	L	Y	T	S	L	G	D	A	A	V	G	R	F	S	D	G	E	V	S	V	Q	I	N	E	N	V	R	G	G	D	I	F	I	I	Q	S	T	C	A	P	T	N	D	N	L	M	E	L	V	V	M	V	D	A	L	R	R	A	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		K	N	L	K	I	F	S	L	N	S	N	P	E	L	A	K	E	I	A	D	I	V	G	V	Q	L	G	K	C	S	V	T	R	F	S	D	G	E	V	Q	I	N	I	E	E	S	I	R	G	C	D	C	Y	I	I	Q	S	T	S	D	P	V	N	E	H	I	M	E	L	L	I	M	V	D	A	L	K	R	A	S
Template Known Secondary structure		T	T							S	S													T												T	T	S							S	S			T	T											S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	R	I	T	A	V	I	P	Y	F	G	Y	A	R	Q	D	R	R	V	R	S	A	R	V	P	I	T	A	K	V	V	A	D	F	L	S	S	V	G	V	D	R	V	L	T	V	D	L	H	A	E	Q	I	Q	G	F	F	D	V	P	V	D	N	V	F	G	S	P	I	L	L	E	D	M	L	Q	L	N	L
Query Conservation
Alig confidence																										.
Template Conservation																										.
Template Sequence		A	K	T	I	N	I	V	I	P	Y	Y	G	Y	A	R	Q	D	R	K	A	R	S	R	E	.	P	I	T	A	K	L	F	A	N	L	L	E	T	A	G	A	T	R	V	I	A	L	D	L	H	A	P	Q	I	Q	G	F	F	D	I	P	I	D	H	L	M	G	V	P	I	L	G	E	Y	F	E	G	K	N	L
Template Known Secondary structure			S							S	S		T	T			S		S	S			S	S		.															T								S		S	S	G	G	G	G	G	G		S	S																	T	T
Template Predicted Secondary structure																										.
Template SS confidence
		87	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110		.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.
Predicted Secondary structure
Query SS confidence
Query Sequence		D	N	P	I	V	V	S	P	D	I	G	G	V	V	R	A	R	A	I	A	K	L	L	N	D	T	D	M	A	I	I	D	K	R	R	P	R	A	N	V	S	Q	V	M	H	I	I	G	D	V	A	G	R	D	C	V	L	V	D	D	M	I	D	T	G	G	T	L	C	K	A	A	E	A	L	K	E	R	G	A
Query Conservation
Alig confidence																										.											.	.	.	.	.	.	.	.	.
Template Conservation																										.											.	.	.	.	.	.	.	.	.
Template Sequence		E	D	I	V	I	V	S	P	D	H	G	G	V	T	R	A	R	K	L	A	D	R	L	K	.	A	P	I	A	I	I	D	K	R	M	.	.	.	.	.	.	.	.	.	N	I	V	G	N	I	E	G	K	T	A	I	L	I	D	D	I	I	D	T	A	G	T	I	T	L	A	A	N	A	L	V	E	N	G	A
Template Known Secondary structure		S	S						S	S	G	G	G											T	T	.											.	.	.	.	.	.	.	.	.				S			T	T	S										S	S													T	T	T
Template Predicted Secondary structure																										.											.	.	.	.	.	.	.	.	.
Template SS confidence
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.		190	.	.	.	.	.	.	.	.	.										200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.
		242	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	R	V	F	A	Y	A	T	H	P	I	F	S	G	N	A	A	N	N	L	R	N	S	V	I	D	E	V	V	V	C	D	T	I	P	L	S	D	E	I	K	S	L	P	N	V	R	T	L	T	L	S	G	M	L	A	E	A	I	R	R	I	S	N	E	E	S	I	S	A	M	F
Query Conservation
Alig confidence																																									.
Template Conservation																																									.
Template Sequence		K	E	V	Y	A	C	C	T	H	P	V	L	S	G	P	A	V	E	R	I	N	N	S	T	I	K	E	L	V	V	T	N	S	I	K	L	P	E	E	.	K	K	I	E	R	F	K	Q	L	S	V	G	P	L	L	A	E	A	I	I	R	V	H	E	Q	Q	S	V	S	Y	L	F
Template Known Secondary structure		S													T	T							T	S	S		S						S	S	S				S	S	.	S			S	S																				T				T	T
Template Predicted Secondary structure																																									.
Template SS confidence
		245	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.		.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions