Job Description P0AF36 Confidence 44.85% Date Thu Jan 5 11:25:03 GMT 2012 Rank 57 Aligned Residues 29 % Identity 38% Template c1ij3C_ PDB info PDB header:transcription Chain: C: PDB Molecule:general control protein gcn4; PDBTitle: gcn4-pvsl coiled-coil trimer with serine at the a(16)2 position Resolution 1.80 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		37	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	S	L	S	Q	E	V	Q	N	A	Q	H	Q	R	E	E	L	E	R	E	N	N	H	L	K	E	Q	Q	N	G	W	Q	E	R	L	Q	A	L	L	G
Query Conservation
Alig confidence									.	.	.	.	.	.	.																.	.	.	.
Template Conservation									.	.	.	.	.	.	.																.	.	.	.
Template Sequence		K	Q	L	E	D	K	V	.	.	.	.	.	.	.	E	E	L	L	S	K	S	Y	H	L	E	N	E	V	A	.	.	.	.	R	L	K	K	L	V	G
Template Known Secondary structure									.	.	.	.	.	.	.																.	.	.	.
Template Predicted Secondary structure									.	.	.	.	.	.	.																.	.	.	.
Template SS confidence
		3	.	.	.	.	.	.								10	.	.	.	.	.	.	.	.	.	20	.	.	.	.					.	.	.	.	.	30	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions