 |
Job Description | P0A6Z1 | Confidence | 94.46% | Date | Thu Jan 5 11:04:16 GMT 2012 |
Rank | 106 | Aligned Residues | 96 |
% Identity | 15% | Template | d1t6ca2 |
SCOP info | Ribonuclease H-like motif
| Actin-like ATPase domain
| Ppx/GppA phosphatase
|
Resolution | 1.53 |
|
 |
  |   |
199 | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
Q | E | G | V | I | A | V | Y | D | L | G | G | G | T | F | D | I | S | I | L | R | L | S | R | G | V | F | E | V | L | A | T | G | G | D | S | A | L | G | G | D | D | F | D | H | L | L | A | D | Y | I | R | E | Q | A | G | I | P | D | R | S | D | N | R | V | Q | R | E | L | L | D | A | A | I | A | A | K | I | A | L |
Query Conservation |   |
  |   |   |   |
|
|
|   |
|   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . |
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |
|
|
|
|
|
|
|
|
|   |   |   |   |   |   |   | . | . | . | . | . |   |   |   |   |   |
|
|   |
|
| . | . | . | . | . | . | . | . |   |
|
|
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |
|   |   |   |
Template Sequence |   |
P | E | G | E | V | C | V | V | D | Q | G | G | G | S | T | E | Y | V | F | G | K | G | Y | K | . |
. |
. |
. |
. |
V | R | E | V | I | S | L | P | I | G | . |
. |
. |
. |
. |
. |
. |
. |
I | V | N | L | T | E | T | F | F | K | Q | D | P | P | T | E | E | E | V | K | R | F | F | E | F | L | E | K | E | L | S | K | V |
Template Known Secondary structure |   |
|
| S |  |  |  |  |  |  |  |  | T | T |  |  |  |  |  |  |  |  | T | T |  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
Template Predicted Secondary structure |   |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . |  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
133 | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | |
|
|
|
|
. | . | . | 160 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
. | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . |
  |
  |   |
279 | 280 | . | . | . | . | . | . | . | . | . | 290 | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|
|
|
|
|  |  |  |  |  |
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
S | D | A | D | S | V | T | V | N | V | A | G | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
W | Q | G | E | I | S | R | E | Q | F | N | E | L | I | A | P | L |
Query Conservation |   |
|   |   |   |   |   |   |
|   |
|   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |   |   |   |   |
|
|
|   |
|
|
|   |   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |
|   |   |   |   |   |   |
|
Template Sequence |   |
K | K | P | V | D | T | I | V | G | L | G | G | T | I | T | T | L | A | A | L | E | Y | N | V | Y | P | Y | D | P | Q | K | V | H | G | K | V | L | T | Y | G | Q | I | K | K | W | F | D | T | F |
Template Known Secondary structure |   |
|
|
|
| S |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S |
|
|  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |
|
|
|
|  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . |
  |
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server |
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf] [Import into BibTeX] |
  |
|
|