|   |
203 | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 | . | . |
Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
I | A | V | Y | D | L | G | G | G | T | F | D | I | S | I | L | R | L | S | R | G | V | F | E | V | L | A | T | G | G | D | S | A | L | G | G | D | D | F | D | H | L | L | A | D | Y | I | R | E | Q | A | G | I | P | D | R | S | D | N | R | V | Q | R | E | L | L | D | A | A | I | A | A | K | I | A | L | S | D | A | D |
Query Conservation |   |
|
|
|   |
|   |
|
|
|
|   |
|
|
|
|   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|
|
|   |   |
|
|   |   |
|   |   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|   |   |   |   |
|   |   |
|   |   |
|
|   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |   | . |
|   |
|
|
|   |
|   |
|
|
|
| . | . | . | . | . | . | . | . |
|
|
|
|   |   |
|   |   |
|
|
|
|   |
|
| . | . | . | . | . | . | . | . | . | . |   |
|
|
|   |
|
|
|   |
|
|   |
|
|
Template Sequence |   |
L | A | I | L | D | L | G | A | G | S | T | D | A | A | I | V | N | A | E | . |
G | Q | I | T | A | V | H | L | A | G | A | G | . |
. |
. |
. |
. |
. |
. |
. |
N | M | V | S | L | L | I | K | T | E | L | G | L | E | D | L | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
S | L | A | E | A | I | K | K | Y | P | L | A | K | V |
Template Known Secondary structure |   |
 |  |  |  |  |  |
| S | S |  |  |  |  |  |  |  |
| S | S | . | S |
|  |  |  |  |  |  |  |
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |  | T |
| S |
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  | S |
|  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
| . |
|  |  |  |  |  |  |  |
|
|
|  | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  | . | . | . | . | . | . | . | . | . | . |  |  |  |  |  |  |  |  |
|
|
|  |  |
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
411 | . | . | . | . | . | . | . | . | 420 | . | . | . | . | . | . | . | . | . | |
430 | . | . | . | . | . | . | . | . | . | 440 | . | |
|
|
|
|
|
|
|
. | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . |
  |
  |   |
283 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | |
. | . | . | . | . | . | 320 | . | |
|
. | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | . |  |  |  |  |  |  |  |  | . | . |
|
|
|
|  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
Query Sequence |   |
S | V | T | V | N | V | A | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
G | W | Q | G | E | I | S | R | E | Q | F | N | E | L | I | A | P | L | V | K | R | T | L | L | . |
A | C | R | R | A | L | K | D | . |
. |
A | G | V | E | A | D | E | V |
Query Conservation |   |
  |   |   |
|   |
|   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |   |   |   |   |   |
|
|
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|   |   | . |   |
|   |   |   |
|   |   | . | . |   |   |   |   |   |   |   |
|
Alig confidence |   |
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
Template Conservation |   |
|   |   |   |   |
|
|   |
|
|
|   |
|   |
|   |   |   |
|
|
|
|   |
|
|
|
|
|   |   |   |   |   |   |   |
|
|
|
|   |   |
|
|   |
|
|   |
|
|   |
|
|
|   |
|
|   |   |
|
|   |   |
|   |
|
|
|
|   |
|
|
|
|
|
|   |
|
|   |
|
Template Sequence |   |
E | S | L | F | S | I | R | H | E | N | G | A | V | E | F | F | R | E | A | L | S | P | A | V | F | A | K | V | V | Y | I | K | E | G | E | L | V | P | I | D | N | A | S | P | L | E | K | I | R | L | V | R | R | Q | A | K | E | K | V | F | V | T | N | C | L | R | A | L | R | Q | V | S | P | G | G | S | I | R | D | I |
Template Known Secondary structure |   |
| S | S | S |  |  |  |  | T | T | S |
|  |  |  |
| S | S |
|
|
| G | G | G | T | T |
|  |  |  |  |  | T | T |  |  |  |  |  |
|
| S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | S | S | S | S | T | T |
|
| S | T | T |
|
Template Predicted Secondary structure |   |
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
472 | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . |
  |
  |   |
330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 | . | . | |
|
|
|
|
|
|
. | . | |
. | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . |
Predicted Secondary structure |   |
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
| . | . | . | . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
. |
. |
. |
. |
. |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
L | E | V | V | M | V | G | G | S | T | R | V | P | L | V | R | E | R | V | G | E | F | F | . |
. |
. |
. |
. |
. |
. |
G | R | . |
P | P | L | T | S | I | D | P | D | K | V | V | A | I | G | A | A | I | Q | A | D |
Query Conservation |   |
  |   |
|   |
|
|
|
|   |
|
|
|
|   |
|   |   |   |
|   |   |   |
| . | . | . | . | . | . | . |   |   | . |   |
|   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |   |
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . |
|
| . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
  |   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|
|   |
|
|
|   |   |   |   |
|
|   |
|
|   |
|
|   |
|   |   |
|
|
|   |
|
|
|   |
|
|   |
|
|   |   |
Template Sequence |   |
A | F | V | V | L | V | G | G | S | S | L | D | F | E | I | P | Q | L | I | T | E | A | L | S | H | Y | G | V | V | A | G | Q | G | N | I | R | G | T | E | G | P | R | N | A | V | A | T | G | L | L | L | A | G | Q |
Template Known Secondary structure |   |
|  |  |  |  |  | S | G | G | G | G | S | S | S |  |  |  |  |  |  |  |  |  |  | T | T | T |
|  |  |  |  |
|
| G | G | G | T | S |
| S |
|
|  |  |  |  |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
 |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
552 | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . |
  |