Job Description P0A6Z1 Confidence 99.54% Date Thu Jan 5 11:04:16 GMT 2012 Rank 40 Aligned Residues 254 % Identity 20% Template d1huxa_ SCOP info Ribonuclease H-like motif Actin-like ATPase domain BadF/BadG/BcrA/BcrD-like Resolution 3.00

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	A	A	G	I	D	L	G	T	T	N	S	L	V	A	T	V	R	S	G	Q	A	E	T	L	A	D	H	E	G	R	H	L	L	P	S	V	V	H	Y	Q	Q	Q	G	H	S	V	G	Y	D	A	R	T	N	A	A	L	D	T	A	N	T	I	S	S	V	K	R	L	M	G	R	S	L	A	D	I	Q	Q	R
Query Conservation
Alig confidence																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		Y	T	L	G	I	D	V	G	S	T	A	S	K	C	I	I	L	K	D	G	K	E	I	V	A	K	S	L	V	A	V	G	T	G	T	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure										S	S									T	T	T												S	S		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.
		100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	P	H	L	P	Y	Q	F	Q	A	S	E	N	G	L	P	M	I	E	T	A	A	G	L	L	N	P	V	R	V	S	A	D	I	L	K	A	L	A	A	R	A	T	E	A	L	A	G	E	L	D	G	V	V	I	T	V	P	A	Y	F	D	D	A	Q	R	Q	G	T	K	D	A	A	R	L	A	G	L	H	V
Query Conservation
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	G	P	A	R	S	I	S	E	V	L	E	N	A	H	M	K	K	E	D	M	A	F	T	L	A	T	G	Y	G	.	.	.	.	.	.	.	.	.	.	.	R	N	S	L	E	G	I	A
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.															T			G	G	G		S						S	T	T	.	.	.	.	.	.	.	.	.	.	.	T	T	T	T	T	T	T
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																																	39	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.												.	70	.	.	.	.	.	.
		180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	L	L	N	E	P	T	A	A	A	I	A	Y	G	L	D	S	G	Q	E	G	V	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	L	R	L	S	R	G	V	F	E	V	L	A	T	G	G	D	S	A	L	G	G	D	D	F	D	H	L	L	A	D	Y	I	R	E	Q	A	G	I	P	D	R	S
Query Conservation
Alig confidence																								.	.																	.	.																																			.	.	.	.
Template Conservation																								.	.																	.	.																																			.	.	.	.
Template Sequence		D	K	Q	M	S	E	L	S	C	H	A	M	G	A	S	F	I	W	P	N	V	H	.	.	T	V	I	D	I	G	G	Q	D	V	K	V	I	H	V	E	.	.	N	G	T	M	T	N	F	Q	M	N	D	K	C	A	A	G	T	G	R	F	L	D	V	M	A	N	I	L	E	V	K	V	S	D	.	.	.	.
Template Known Secondary structure		S																		T	T			.	.							T	T									.	.	T	T									S	S			T	T	S												T			T	T	T	.	.	.	.
Template Predicted Secondary structure																								.	.																	.	.																																			.	.	.	.
Template SS confidence
		77	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.			.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.			.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.			290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.
Predicted Secondary structure																																.	.
Query SS confidence																																.	.
Query Sequence		D	N	R	V	Q	R	E	L	L	D	A	A	I	A	A	K	I	A	L	S	D	A	D	S	V	T	V	N	V	A	.	.	G	W	Q	G	E	I	S	R	E	Q	F	N	E	L	I	A	P	L	V	K	R	T	L	L	A	C	R	R	A	L	K	D	A	G	V	E	A	D	E	V	L	E	V	V	M	V	G	G
Query Conservation																																.	.
Alig confidence		.	.	.	.	.	.	.																								.	.																																				.	.	.	.
Template Conservation		.	.	.	.	.	.	.																																																													.	.	.	.
Template Sequence		.	.	.	.	.	.	.	L	A	E	L	G	A	K	S	T	K	R	V	A	I	S	S	T	C	T	V	F	A	E	S	E	V	I	S	Q	L	S	K	G	T	D	K	I	D	I	I	A	G	I	H	R	S	V	A	S	R	V	I	G	L	A	N	R	V	G	I	.	.	.	.	V	K	D	V	V	M	T	G	G
Template Known Secondary structure		.	.	.	.	.	.	.						T	T			S								S														T	T																								T	T			.	.	.	.		S	S					S	G
Template Predicted Secondary structure		.	.	.	.	.	.	.																																																													.	.	.	.
Template SS confidence
									149	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.					.	210	.	.	.	.	.	.	.
		338	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		S	T	R	V	P	L	V	R	E	R	V	G	E	F	F	G	R	P	P	L	T	S	I	D	P	D	K	V	V	A	I	G	A	A	I	Q	A	D	I	L	V	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	A	Q	N	Y	G	V	R	G	A	L	E	E	G	L	G	V	E	I	K	T	S	P	L	A	Q	Y	N	G	A	L	G	A	A	L	Y	A	Y	K	K	A	A
Template Known Secondary structure		G	G	G														S						G	G	G	G	G														T	T
Template Predicted Secondary structure
Template SS confidence
		218	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions