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Job DescriptionP0A6Z1
Confidence99.79%DateThu Jan 5 11:04:16 GMT 2012
Rank32Aligned Residues276
% Identity13%Templatec3js6A_
PDB info PDB header:unknown functionChain: A: PDB Molecule:uncharacterized parm protein; PDBTitle: crystal structure of apo psk41 parm protein
Resolution1.95 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


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Query Sequence  LAAGIDLGTTNSLVATVRSGQAETLADH. . . . . . . . . . . . . . . . . EGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTI
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Template Sequence  YVXALDFGNGFVKGKI. . NDEKFVIPSRIGRKTNENNQLKGFVDNKLDVSEFIINGNNDEVLLFGNDLDKTTN. . . . . . .
Template Known Secondary structure 
SS..TTS

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   5....10.........20 .........30.........40.........50.........60.........70.....
 
   83......90.........100.........110.........120.........130.........140.........150 .........160.
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Query Sequence  SSVKRLMGRSLADIQQRYPHLPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEALAGELD. GVVITVPAYFD
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Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . TGKDTASTNDRYDIKSFKDLVECSIGLLAREVPEEVVNVVIATGXPSNEI
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STTGGGSTTS
SS
GGGT
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   76...80.........90.........100.........110.........120.....
 
   162.......170.... .....180.........190........ .200.........210.........220..
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Query Sequence  DAQRQGTKDAARL. . . . . . . . . . . . . AGLHVLRLLNEPTAAAIAYGLDSG. . . . . . QEGVIAVYDLGGGTFDISILRLSR
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Template Sequence  GTDKQAKFEKLLNKSRLIEIDGIAKTINVKGVKIVAQPXGTLLDLNXENGKVFKAFTEGKYSVLDFGSGTTIIDTYQ. . .
Template Known Secondary structure  TSSS
TTTTTT
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   126...130.........140.........150.........160.........170.........180.........190.........200..
 
   223......230.........240.........250.........260.........270.........280.........290.........300..
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Query Sequence  GVFEVLATGGDSALGGDDFDHLLADYIREQAGIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQFNE
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Template Sequence  NXKRVEEESFVINKGTIDFYKRIASHVSTPRMIEKGLE. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . FKD
Template Known Secondary structure  TT
GGG
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T

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   203......210.........220.........230.........240 ...
 
   303......310.........320.........330.........340.........350.........360.........370........
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Query Sequence  LIAPLVKRTLLACRRALKDAGVEADEVLEVVMVGGSTRVPLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQADILV
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Template Sequence  EFYKEQDSLIEEVXSNFEITVGNINSIDRIIVTGGGANI. . HFDSLSHYYSDVFEKADDSQFSNVRGYEKLGELLK
Template Known Secondary structure  T

TTS
SSTT..SSS


SSGGG
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   265....270.........280.........290.........300... ......310.........320.........330........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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