Return to main results Retrieve Phyre Job Id

Job DescriptionP0A6Z1
Confidence96.26%DateThu Jan 5 11:04:16 GMT 2012
Rank98Aligned Residues274
% Identity16%Templatec1zc6A_
PDB info PDB header:structural genomics, unknown functionChain: A: PDB Molecule:probable n-acetylglucosamine kinase; PDBTitle: crystal structure of putative n-acetylglucosamine kinase from2 chromobacterium violaceum. northeast structural genomics target3 cvr23.
Resolution2.20 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   16...20.........30.........40.........50.........60.........70.........80.........90.....
Predicted Secondary structure 

























Query SS confidence 















































































Query Sequence  HQRRLAAGIDLGTTNSLVATVRSGQAETLADHEGRHLLPSVVHYQQQGHSVGYDARTNAALDTANTISSVKRLMGRSLAD
Query Conservation       




 


   

    
   

 
    
  

 
         
  
       
       
  

     
Alig confidence 







































........................................
Template Conservation    
 
 







     
 
  
 

            ........................................
Template Sequence  PSIRYLIGVDGGGTGTRIRLHASDGTPLAXAEGGASALSQ. . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . .
Template Known Secondary structure 




SS
TT

S


GGG........................................
Template Predicted Secondary structure 




















........................................
Template SS confidence 















































































   8.10.........20.........30.........40.......
 
   96...100.........110.........120.........130.........140.... .....150.........160.........170...
Predicted Secondary structure 










..









Query SS confidence 
















































. .




























Query Sequence  IQQRYPHLPYQFQASENGLPMIETAAGLLNPVRVSADILKALAARATEA. . LAGELDGVVITVPAYFDDAQRQGTKDAAR
Query Conservation                                



 
  
  
       ..        




      

  
  
  
Alig confidence  .............................



















..




























Template Conservation  .............................        
   
                   
                  
Template Sequence  . . . . . . . . . . . . . . . . . . . . . . . . . . . . . GIAKSWQAVLSTLEAAFQQAGLPAAPASACAIGLGLSGVHNRQWAGEFESQ
Template Known Secondary structure  .............................
TT




GGGS


TTST
Template Predicted Secondary structure  .............................




















Template SS confidence 















































































   48.50.........60.........70.........80.........90........
 
   174.....180.........190.........200.........210.........220.........230.........240.........250...
Predicted Secondary structure 




























Query SS confidence 















































































Query Sequence  LAGLHVLRLLNEPTAAAIAYGLDSGQEGVIAVYDLGGGTFDISILRLSRGVFEVLATGGDSALGGDDFDHLLADYIREQA
Query Conservation   


    

 
  


  
         


 
 



 



          
       


  

  
   
    
Alig confidence 


















...

























































Template Conservation        
 
 

       ...                                          
 
 
           
Template Sequence  APGFARLSLATDGYTTLLG. . . AHGGQPGIIVALGTGSIGEALYPDGSHREAGGWGYPSGDEASGAWLGQRAAQLTQXAL
Template Known Secondary structure 



S
...TTTSSSSS
TTS
S


TTTS
TTS
Template Predicted Secondary structure 







...























Template SS confidence 















































































   99100.........110....... ..120.........130.........140.........150.........160.........170.....
 
   254.....260.........270.........280.........290.........300.. .......310.........320.......
Predicted Secondary structure 




















......



Query SS confidence 
















































. . . . . .
























Query Sequence  GIPDRSDNRVQRELLDAAIAAKIALSDADSVTVNVAGWQGEISREQFNE. . . . . . LIAPLVKRTLLACRRALKDAGVEAD
Query Conservation               
    
  
  

      
 
      


  

 ......        
   
   
        
Alig confidence 





























....














......






















..
Template Conservation                                ....                   
  
  

   
  
   
  
   ..
Template Sequence  DGRHSHSPLTRAVLDFVGGDWQAXXAWNGR. . . . ATPAQFARLAPLVLSAARVDPEADALLRQAGEDAWAIARALDPQ. .
Template Known Secondary structure  TSS


TSST....

TTTTT

TT..
Template Predicted Secondary structure 













....










..
Template SS confidence 















































































   176...180.........190.........200..... ....210.........220.........230.........240.........
 
   328.330.........340. ........350.........360.........370....
Predicted Secondary structure 






..










Query SS confidence 













. .
































Query Sequence  EVLEVVMVGGSTRV. . PLVRERVGEFFGRPPLTSIDPDKVVAIGAAIQA
Query Conservation   
  
 



 


..
 
   
   
   
      




 


   
Alig confidence 













..

















.......







Template Conservation   
  






       
   
   
       .......  

  

Template Sequence  DELPVALCGGLGQALRDWLPPGFRQRLVAPQGDS. . . . . . . AQGALLLL
Template Known Secondary structure 

S
STGGGS




SS
.......T
Template Predicted Secondary structure 








.......
Template SS confidence 
















































   250.........260.........270.........280... ......290.
 
Download:Text version

No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
© Structural Bioinformatics Group, Imperial College, London
Lawrence Kelley, Benjamin Jefferys 
Disclaimer
Terms and Conditions