Job Description P0A6Z1 Confidence 97.25% Date Thu Jan 5 11:04:16 GMT 2012 Rank 86 Aligned Residues 255 % Identity 15% Template c1z6rC_ PDB info PDB header:transcription Chain: C: PDB Molecule:mlc protein; PDBTitle: crystal structure of mlc from escherichia coli Resolution 2.70 Å

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		15	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	H	Q	R	R	L	A	A	G	I	D	L	G	T	T	N	S	L	V	A	T	V	R	S	G	Q	A	E	T	L	A	D	H	E	G	R	H	L	L	P	S	V	V	H	Y	Q	Q	Q	G	H	S	V	G	Y	D	A	R	T	N	A	A	L	D	T	A	N	T	I	S	S	V	K	R	L	M	G	R	S	L	A
Query Conservation
Alig confidence																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		E	T	E	A	W	H	Y	L	S	L	R	I	S	R	G	E	I	F	L	A	L	R	D	L	S	S	K	L	V	V	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure				T	T										T	T									T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		81	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110
		95	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.			.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.
Predicted Secondary structure																																																				.	.																					.	.	.	.	.	.	.	.
Query SS confidence																																																				.	.																					.	.	.	.	.	.	.	.
Query Sequence		D	I	Q	Q	R	Y	P	H	L	P	Y	Q	F	Q	A	S	E	N	G	L	P	M	I	E	T	A	A	G	L	L	N	P	V	R	V	S	A	D	I	L	K	A	L	A	A	R	A	T	E	A	.	.	L	A	G	E	L	D	G	V	V	I	T	V	P	A	Y	F	D	D	A	Q	.	.	.	.	.	.	.	.
Query Conservation																																																				.	.																					.	.	.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																														.	.																					.	.	.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	E	E	S	Q	E	L	A	L	K	D	D	L	P	L	L	D	R	I	I	S	H	I	D	Q	F	F	I	R	H	Q	K	K	L	E	R	L	T	S	I	A	I	T	L	P	G	I	I	D	T	E	N	G	I	V	H	R	X	P	F
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.								S	S		S	S																	T	T	T	T												S	S				T	T	T	T						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
																							111	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.
											165	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.			.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.	.																																.	.
Query SS confidence		.	.	.	.	.	.	.	.	.																																.	.
Query Sequence		.	.	.	.	.	.	.	.	.	R	Q	G	T	K	D	A	A	R	L	A	G	L	H	V	L	R	L	L	N	E	P	T	A	A	A	I	A	Y	G	L	.	.	D	S	G	Q	E	G	V	I	A	V	Y	D	L	G	G	G	T	F	D	I	S	I	L	R	L	S	R	G	V	F	E	V	L	A	T	G	G	D
Query Conservation		.	.	.	.	.	.	.	.	.																																.	.
Alig confidence		.	.	.	.	.	.	.	.	.									.	.	.					.																.	.																	.											.	.	.	.	.
Template Conservation																			.	.	.					.																																		.											.	.	.	.	.
Template Sequence		Y	E	D	V	K	E	X	P	L	G	E	A	L	E	Q	H	T	.	.	.	G	V	P	V	.	Y	I	Q	H	D	I	S	A	W	T	X	A	E	A	L	F	G	A	S	R	G	A	R	D	V	I	Q	V	V	I	D	H	N	.	V	G	A	G	V	I	T	D	G	H	.	.	.	.	.	L	L	H	A	G	S
Template Known Secondary structure			T	T		S	S	B											.	.	.		S			.																T	S	T	T	T	T		S	S							S	S	S	.								T	T		.	.	.	.	.		T	T	T	T	S
Template Predicted Secondary structure																			.	.	.					.																																		.											.	.	.	.	.
Template SS confidence
		170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.				.	.	.	190		.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.		.	.	.	.	.	.	230	.	.	.						.	.	.	.	.	.
		234	.	.	.																												.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.
Predicted Secondary structure						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		S	A	L	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	D	D	F	D	H	L	L	A	D	Y	I	R	E	Q	A	G	I	P	D	R	S	D	N	R	V	Q	R	E	L	L	D	A	A	I	A	A	K	I	A	L	S	D	A	D	S	V	T	V
Query Conservation						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		S	S	L	V	E	I	G	H	T	Q	V	D	P	Y	G	K	R	C	Y	C	G	N	H	G	C	L	E	T	I	A	S	V	D	S	I	L	E	L	A	Q	L	R	L	N	Q	S	X	S	S	X	L	H	G	Q	P	L	T	V	D	S	L	C	Q	A	A	L	R	G	.	.	.	.	.	.	.	.	.	.	.	.
Template Known Secondary structure		S			B		G	G	G	S	B	S		T	T	S		B		T	T	S	S	B	S	B	T					S														T		S	S		G	G	G	G	S														T	.	.	.	.	.	.	.	.	.	.	.	.
Template Predicted Secondary structure																																																																						.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.
		287	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.						.	.	.	.	.	.	.	.	350	.	.							.	.	.
Predicted Secondary structure																																																									.	.	.	.	.												.	.	.	.	.	.
Query SS confidence																																																									.	.	.	.	.												.	.	.	.	.	.
Query Sequence		N	V	A	G	W	Q	G	E	I	S	R	E	Q	F	N	E	L	I	A	P	L	V	K	R	T	L	L	A	C	R	R	A	L	K	D	A	G	V	E	A	D	E	V	L	E	V	V	M	V	G	G	S	T	R	V	.	.	.	.	.	P	L	V	R	E	R	V	G	E	F	F	.	.	.	.	.	.	G	R	P
Query Conservation																																																									.	.	.	.	.												.	.	.	.	.	.
Alig confidence		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.														.	.	.	.	.												.	.	.	.	.	.
Template Conservation		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template Sequence		.	.	.	.	.	.	.	.	.	.	D	L	L	A	K	D	I	I	T	G	V	G	A	H	V	G	R	I	L	A	I	X	V	N	L	F	N	.	.	.	.	.	P	Q	K	I	L	I	G	S	P	L	S	K	A	A	D	I	L	F	P	V	I	S	D	S	I	R	Q	Q	A	L	P	A	Y	S	Q	H	I	S
Template Known Secondary structure		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.		S						S	G	G	G	G	G																S						S	S
Template Predicted Secondary structure		.	.	.	.	.	.	.	.	.	.																												.	.	.	.	.
Template SS confidence
												308	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.						.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.
		356	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	L	T	S	I	D	P	D	K	V	V	A	I	G	A	A	I	Q	A	D	I	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	E	S	T	Q	F	S	N	Q	G	T	X	A	G	A	A	L	V	K	D	A	X
Template Known Secondary structure						S	S				T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		373	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.

No model constructed - rank, confidence too low

---

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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