|   |
13 | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | |
|
. | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 |
Predicted Secondary structure |   |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  | . | . |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |
|
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . |
. |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | P | H | Q | R | R | L | A | A | G | I | D | L | G | T | T | N | S | L | V | A | T | V | R | . |
. |
S | G | Q | A | E | T | L | A | D | H | E | G | R | H | L | L | P | S | V | V | H | Y | Q | Q | Q | G | H | S | V | G | Y | D | A | R | T | N | A | A | L | D | T | A | N | T | I | S | S | V | K | R | L | M | G |
Query Conservation |   |
  |   |   |   |   |   |   |   |
|
|
|
|
|   |
|
|
|   |   |   |
|
|   |   |   | . | . |   |
|   |   |   |
|
|   |
|   |   |   |   |
|   |   |
|
|   |
|   |   |   |   |   |   |   |   |   |
|   |   |
|   |   |   |   |   |   |   |
|   |   |   |   |   |   |   |
|   |   |
|
|
Alig confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
|
|
|   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|
|
|
|   |   |
|   |
|   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|
|   |   |
|   |   |
|
|   |   |   |   |   |   |   |   |   |
|
|
|
|
Template Sequence |   |
P | D | G | T | E | N | G | D | F | L | A | L | D | L | G | G | T | N | F | R | V | L | L | V | K | I | R | S | G | K | K | R | T | V | E | M | H | N | K | I | Y | A | I | P | I | E | I | M | Q | G | T | G | E | E | L | F | D | H | I | V | S | C | I | S | D | F | L | D | Y | M | G | I | K | G | P | R | M | P | L | G |
Template Known Secondary structure |   |
|
| S |
|
|
|  |  |  |  |  |  |  |  | S | S | S |
|  |  |  |  |  |  |  |  |  |
| S | S | S |
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  | T | S | B | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
|
|  |  |  |
Template Predicted Secondary structure |   |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . |
  |
  |   |
91 | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 |
Predicted Secondary structure |   |
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
R | S | L | A | D | I | Q | Q | R | Y | P | H | L | P | Y | Q | F | Q | A | S | E | N | G | L | P | M | I | E | T | A | A | G | L | L | N | P | V | R | V | S | A | D | I | L | K | A | L | A | A | R | A | T | E | A | L | A | G | E | L | D | G | V | V | I | T | V | P | A | Y | F | D | D | A | Q | R | Q | G | T | K | D |
Query Conservation |   |
  |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|   |
|   |   |
|   |   |
|   |   |   |   |   |   |   |   |   |   |   |   |   |   |   |
|
|
|
|
|   |   |   |   |   |   |
|
|   |   |
|   |   |
Alig confidence |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Conservation |   |
|
|
|
| . | . | . | . | . | . | . | . | . | . |
|
|   |   |
|   |
|
|   |   |
|   |
|
|   |
|
|
|
|
|   |   |   |   |
|   |
|   |
|
|   |   |
|
|   |   |
|
|   |
|   |   |   | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Sequence |   |
F | T | F | S | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
F | P | C | Q | Q | T | S | L | D | A | G | I | L | I | T | W | T | K | G | F | K | A | T | D | C | V | G | H | D | V | V | T | L | L | R | D | A | I | K | R | R | E | E | . |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
. |
Template Known Secondary structure |   |
 |  |  |
| . | . | . | . | . | . | . | . | . | . | S |
|  |  |  |  |  | T | T |  |  |  |  |
|
|
|
| T | T |
|
|
| B | T |
| T | T | S | B |  |  |  |  |  |  |  |  |  |  |  |  | T | S | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template Predicted Secondary structure |   |
 |  |  |  | . | . | . | . | . | . | . | . | . | . |
|
|  |  |  |
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
| . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . | . |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
600 | . | . | . | |
|
|
|
|
|
|
|
|
|
. | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |
  |   |
171 | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 | . | . | . | . | . | . | . | . | . |
Predicted Secondary structure |   |
 |  |  |  |
|
|
|
|
|  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |
Query SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Query Sequence |   |
A | A | R | L | A | G | L | H | V | L | R | L | L | N | E | P | T | A | A | A | I | A | Y | G | L | D | S | G | Q | E | G | V | I | A | V | Y | D | L | G | G | G | T | F | D | I | S | I | L | R |
Query Conservation |   |
|   |   |   |
|
|
|   |   |   |   |
|
|   |
|   |   |
|
|
|   |   |
|   |   |   |   |   |   |   |   |   |
|
|
|   |
|   |
|
|
|
|   |
|
|
|
|   |   |
Alig confidence |   |
. | . | . | . |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
| . | . | . |
|
|
|
|
|
|
|
|
|
|
Template Conservation |   |
. | . | . | . |   |   |
|   |
|   |
|
|
|
|
|
|
|
|
|
|   |
|   |
|
|   |   |   |   |   |   |
|
|   |
|
| . | . | . |
|
|
|
|
|
|   |
|   |
|
Template Sequence |   |
. |
. |
. |
. |
F | D | L | D | V | V | A | V | V | N | D | T | V | G | T | M | M | T | C | A | Y | E | E | P | T | C | E | V | G | L | I | V | . |
. |
. |
G | T | G | S | N | A | C | Y | M | E |
Template Known Secondary structure |   |
. | . | . | . |
|
|
|  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  | T | T |
| T | T |  |  |  |  |  |  |  | . | . | . | S | S | S |  |  |  |  |  |  |  |
Template Predicted Secondary structure |   |
. | . | . | . |
|
|
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  | . | . | . |
|
|
|
|
|  |  |  |  |  |
Template SS confidence |   |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
  |   |
|
|
|
|
647 | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | |
|
|
. | 680 | . | . | . | . | . | . | . | . |
  |