Job Description P76469 Confidence 37.66% Date Thu Jan 5 12:23:13 GMT 2012
Rank 360 Aligned Residues 117
% Identity 11% Template c3ks6A_
PDB info
PDB header: hydrolaseChain: A: PDB Molecule: glycerophosphoryl diester phosphodiesterase;
PDBTitle: crystal structure of putative glycerophosphoryl diester2 phosphodiesterase (17743486) from agrobacterium tumefaciens3 str. c58 (dupont) at 1.80 a resolution
Resolution 1.80 Å
Show / Hide SS confidence
Show / Hide Conservation and Alignment quality
   
135 . . . . 140 . . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . .
. . 190 . . . . . . . . . 200 . . . . .
Predicted Secondary structure  
. . . . . . . . .
Query SS confidence  
.
.
.
.
.
.
.
.
.
Query Sequence  
I E N Y M A Q V N D S L C L L V Q V E S K T A L D N L D E I L D V E G I D G V F I G P A D L S A S L G Y P .
.
.
.
.
.
.
.
.
D N A G H P E V Q R I I E T S I R R
Query Conservation  
                                                      . . . . . . . . .                              
Alig confidence  
. . . . . . . . . . .
Template Conservation  
                                                          . .                                                                                                
Template Sequence  
V I A G L E R H S X L E R T T F S S F L L A S X D E L W K A .
.
T T R P R L W L V S P S V L Q Q L G P G A V I E T A I A H S I H E I G V H I D T A D A G L X A Q
Template Known Secondary structure  
T T G G G S . . S T T G G G
Template Predicted Secondary structure  
. .
Template SS confidence  
   
121 . . . . . . . . 130 . . . . . . . . . 140 . . . . . . . . . 150
. . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . .
 
   
206 . . . 210 . . . . . . . .
. 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . .
Predicted Secondary structure  
.
Query SS confidence  
.
Query Sequence  
I R A A G K A A G F L A V .
A P D M A Q Q C L A W G A N F V A V G V D T M L Y S D A L D Q R L A M F
Query Conservation  
                    .                                                                
Alig confidence  
. .
Template Conservation  
                                          .                                
Template Sequence  
V Q A A G L D F G C W A A H T P S Q I T K A L D L G V K V F .
T T D R P T L A I A L R T E H R X E A
Template Known Secondary structure  
T T S T S . S
Template Predicted Secondary structure  
.
Template SS confidence  
   
199 200 . . . . . . . . . 210 . . . . . . . . . 220 . . . . . . . .
. 230 . . . . . . . . . 240 . . . . . . .
 
No model constructed - rank, confidence too low
Phyre is for academic use only
Please cite: Protein structure prediction on
the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols
4, 363 - 371 (2009) [pdf ] [Import into BibTeX ]