360 c3ks6A_ Probab=37.66   E-value=29  Score=15.18  Aligned_columns=117  Identities=11%

Q ss_pred             HHHHHHHCCCCCEEEEEECCHHHHHHHHHHHCCCCCCEEEEECHHHHHHHCCC---------CCCCCHHHHHHHHHHHHH
Q ss_conf             78888603866259997199899998999705777888998032777640775---------445714789999999999
Q batch____       135 IENYMAQVNDSLCLLVQVESKTALDNLDEILDVEGIDGVFIGPADLSASLGYP---------DNAGHPEVQRIIETSIRR  205 (267)
Q Consensus       135 ~~~~~~~an~~~~v~~mIEt~~ai~~l~eI~a~pgvD~i~iG~~DLs~slG~~---------~~~~~p~~~~a~~~v~~~  205 (267)
                      ..+.+...+..-.+++...+++.+..+.++  .|.....++.+..+.......         .....+.....-..++..
T Consensus       122 ~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  199 (250)
T c3ks6A_         122 VIAGLERHSXLERTTFSSFLLASXDELWKA--TTRPRLWLVSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADAGLXAQ  199 (250)
T ss_dssp             HHHHHHHTTCGGGEEEEESCHHHHHHHHHH--CCSCEEEEECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCHHHHHH
T ss_pred             HHHHHHHCCCCCCEEEEECCHHHHHHHHHH--CCCCCEEEEECCCCCCCCHHHHHHHHHHCCCCEEEEECCCCCHHHHHH
T ss_conf             999998649977239996898999999985--898819998410002379689998897519949993021278999999


Q ss_pred             HHHHCCEEEEECC-CHHHHHHHHHCCCCEEEECHHHHHHHHHHHHHHHHH
Q ss_conf             9870981899739-978999998556779998145999999999999998
Q batch____       206 IRAAGKAAGFLAV-APDMAQQCLAWGANFVAVGVDTMLYSDALDQRLAMF  254 (267)
Q Consensus       206 a~~~g~~~g~~~~-~~~~~~~~~~~G~~~~~~~~D~~~l~~a~~~~~~~~  254 (267)
                      ++.+|+++..++. +++..+++++.|++.+ +..+-..+....++.....
T Consensus       200 ~~~~g~~v~~wtv~~~~~~~~~~~~Gvd~I-~TD~P~~~~~~~~~~~~~~  248 (250)
T c3ks6A_         200 VQAAGLDFGCWAAHTPSQITKALDLGVKVF-TTDRPTLAIALRTEHRXEA  248 (250)
T ss_dssp             HHHTTCEEEEECCCSHHHHHHHHHHTCSEE-EESCHHHHHHHHHHHHHHH
T ss_pred             HHHCCCEEEEECCCCHHHHHHHHHCCCCEE-EECCHHHHHHHHHHHHHHC
T ss_conf             986598899972799899999997699899-9199899999997643420