Job Description P37621 Confidence 99.97% Date Thu Jan 5 11:55:56 GMT 2012 Rank 2 Aligned Residues 398 % Identity 16% Template d1pw4a_ SCOP info MFS general substrate transporter MFS general substrate transporter Glycerol-3-phosphate transporter Resolution 3.30

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		2	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	E	P	V	A	E	P	A	L	N	G	L	R	L	N	L	R	I	V	S	I	V	M	F	N	F	A	S	Y	L	T	I	G	L	P	L	A	V	L	P	G	Y	V	H	D	V	M	G	F	S	A	F	W	A	G	L	V	I	S	L	Q	Y	F	A	T	L	L	S	R	P	H	A	G	R	Y	A	D	S	L	G
Query Conservation
Alig confidence																																															.
Template Conservation																																															.
Template Sequence		R	L	P	A	A	E	I	D	P	T	Y	R	R	L	R	W	Q	I	F	L	G	I	F	F	G	Y	A	A	Y	Y	L	V	R	K	N	F	A	L	A	M	P	Y	L	V	E	.	Q	G	F	S	R	G	D	L	G	F	A	L	S	G	I	S	I	A	Y	G	F	S	K	F	I	M	G	S	V	S	D	R	S	N
Template Known Secondary structure						S																													T	S								T	T	S	.	S	T	T		S	S																											S
Template Predicted Secondary structure																																															.
Template SS confidence
		13	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.		.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.
		82	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.
Predicted Secondary structure
Query SS confidence
Query Sequence		P	K	K	I	V	V	F	G	L	C	G	C	F	L	S	G	L	G	Y	L	T	A	G	L	T	A	S	L	P	V	I	S	L	L	L	L	C	L	G	R	V	I	L	G	I	G	Q	S	F	A	G	T	G	S	T	L	W	G	V	G	V	V	G	S	L	H	I	G	R	V	I	S	W	N	G	I	V	T	Y	G
Query Conservation
Alig confidence																													.	.	.	.
Template Conservation																													.	.	.	.
Template Sequence		P	R	V	F	L	P	A	G	L	I	L	A	A	A	V	M	L	F	M	G	F	V	P	W	A	T	S	.	.	.	.	S	I	A	V	M	F	V	L	L	F	L	C	G	W	F	Q	G	M	G	W	P	P	C	G	R	T	M	V	H	W	W	S	Q	K	E	R	G	G	I	V	S	V	W	N	C	A	H	N	V
Template Known Secondary structure																												S	.	.	.	.	S	S	S																T										T	T		T	T	T
Template Predicted Secondary structure																													.	.	.	.
Template SS confidence
		92	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.					.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.
		162	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.						.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.
Predicted Secondary structure																		.	.	.	.	.
Query SS confidence																		.	.	.	.	.
Query Sequence		A	M	A	M	G	A	P	L	G	V	V	F	Y	H	W	G	.	.	.	.	.	G	L	Q	A	L	A	L	I	I	M	G	V	A	L	V	A	I	L	L	A	I	P	R	P	T	V	K	A	S	K	G	K	P	L	P	F	R	A	V	L	G	R	V	W	L	Y	G	M	A	L	A	L	A	S	A	G	F	G	V
Query Conservation																		.	.	.	.	.
Alig confidence																		.	.	.	.	.
Template Conservation
Template Sequence		G	G	G	I	P	P	L	L	F	L	L	G	M	A	W	F	N	D	W	H	A	A	L	Y	M	P	A	F	C	A	I	L	V	A	L	F	A	F	A	M	M	R	D	T	P	Q	S	C	G	L	P	P	I	E	E	Y	K	N	D	T	A	K	Q	I	F	M	Q	Y	V	L	P	N	K	L	L	W	Y	I	A	I
Template Known Secondary structure				T	S												T			S	T	T		T																					S	S	T	T	T				S		T	T	T						T							T	S	S
Template Predicted Secondary structure
Template SS confidence
		168	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.
		237	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260																				.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.
Predicted Secondary structure																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		I	A	T	F	I	T	L	F	Y	D	A	K	G	W	D	G	A	A	F	A	L	T	L	F	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	S	C	A	F	V	G	T	R	L	L	F	P	N	G	I	N	R	I	G	G	L	N	V	A	M	I	C	F	S	V	E	I	I	G	L	L	L
Query Conservation																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	N	V	F	V	Y	L	L	R	Y	G	I	L	D	W	S	P	T	Y	L	K	E	V	K	H	F	A	L	D	K	S	S	W	A	Y	F	L	Y	E	Y	A	G	I	P	G	T	L	L	C	G	W	M	S	D	K	V	F	R	G	N	R	G	A	T	G	V	F	F	M	T	L	V	T	I	A	T	I	V	Y	W
Template Known Secondary structure																					B	T	T	B	S																																T	S	T	T																				T	T
Template Predicted Secondary structure
Template SS confidence
		261	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340
		298	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.		.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.
Predicted Secondary structure																																																								.
Query SS confidence																																																								.
Query Sequence		V	G	V	A	T	M	P	W	M	A	K	I	G	V	L	L	A	G	A	G	F	S	L	V	F	P	A	L	G	V	V	A	V	K	A	V	P	Q	Q	N	Q	G	A	A	L	A	T	Y	T	V	F	M	D	L	.	S	L	G	V	T	G	P	L	A	G	L	V	M	S	W	A	G	V	P	V	I	Y	L	A	A
Query Conservation																																																								.
Alig confidence																																																								.
Template Conservation
Template Sequence		M	N	P	A	G	N	P	T	V	D	M	I	C	M	I	V	I	G	F	L	I	Y	G	P	V	M	L	I	G	L	H	A	L	E	L	A	P	K	K	A	A	G	T	A	A	G	F	T	G	L	F	G	Y	L	G	G	S	V	A	A	S	A	I	V	G	Y	T	V	D	F	F	G	W	D	G	G	F	M	V	M
Template Known Secondary structure		S			T	T																	T													T	S		T	T																															S	S		S
Template Predicted Secondary structure
Template SS confidence
		341	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
		377	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	G	L	V	A	I	A	L	L	L	T	W	R	L	K	K	R	P	P	E	H	V	P	E	A	A	S	S
Query Conservation
Alig confidence
Template Conservation
Template Sequence		I	G	G	S	I	L	A	V	I	L	L	I	V	V	M	I	G	E	K	R	R	H	E	Q	L	L	Q	E
Template Known Secondary structure																									G	G	G	G	G
Template Predicted Secondary structure
Template SS confidence
		421	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions