Job Description P37621 Confidence 1.47% Date Thu Jan 5 11:55:56 GMT 2012 Rank 60 Aligned Residues 136 % Identity 13% Template c3p5nA_ PDB info PDB header:transport protein Chain: A: PDB Molecule:riboflavin uptake protein; PDBTitle: structure and mechanism of the s component of a bacterial ecf2 transporter Resolution 3.60 Å

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		7	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	P	A	L	N	G	L	R	L	N	L	R	I	V	S	I	V	M	F	N	F	A	S	Y	L	T	I	G	L	P	L	A	V	L	P	G	Y	V	H	D	V	M	G	F	S	A	F	W	A	G	L	V	I	S	L	Q	Y	F	A	T	L	L	S	R	P	H	A	G	R	Y	A	D	S	L	G	P	K	K	I	V
Query Conservation
Alig confidence																																																.	.	.
Template Conservation																																																.	.	.
Template Sequence		P	F	L	P	P	Y	L	T	L	D	F	S	D	V	P	S	L	L	A	T	F	T	F	G	P	V	A	G	I	I	V	A	L	V	K	N	L	L	N	Y	L	F	S	M	G	D	.	.	.	P	V	G	P	F	A	N	F	L	A	G	A	S	F	L	L	T	A	Y	A	I	Y	K	N	K	R	S	T	K	S	L
Template Known Secondary structure		T	T	S		S	S					G	G	G								T	T	S																				T	T	T		.	.	.	S	S																					S	S	S		S
Template Predicted Secondary structure																																																.	.	.
Template SS confidence
		36	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.				.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.
		87	.	.	90	.	.	.	.	.	.	.	.	.	100							.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.
Query Sequence		V	F	G	L	C	G	C	F	L	S	G	L	G	Y	.	.	.	.	.	.	L	T	A	G	L	T	A	S	L	P	V	I	S	L	L	L	L	C	L	G	R	V	I	L	G	I	G	Q	S	F	A	G	T	G	S	T	L	W	G	V	G	V	V	G	S
Query Conservation																.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.
Template Conservation
Template Sequence		I	T	G	L	I	I	A	T	I	V	M	T	I	V	L	S	I	L	N	Y	F	V	L	L	P	L	Y	G	M	K	V	I	I	V	S	G	I	I	P	F	N	I	I	K	G	I	V	I	S	I	V	F	I	L	L	Y	R	R	L	A	N	F	L	K	R
Template Known Secondary structure																					T	T	T	T	T																																		T	T					T
Template Predicted Secondary structure
Template SS confidence
		113	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions