Job Description P69805 Confidence 4.52% Date Thu Jan 5 12:12:01 GMT 2012 Rank 90 Aligned Residues 38 % Identity 32% Template d1m9fd_ SCOP info Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Retrovirus capsid protein, N-terminal core domain Resolution 1.73

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		57	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.														.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.
Predicted Secondary structure														.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence														.									.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		N	N	E	A	R	K	Q	A	I	R	R	H	.	L	E	F	F	N	T	Q	P	.	.	.	.	.	.	.	.	.	.	.	.	.	F	V	A	A	P	I	L	G	V	T	L	A	L	E	E	Q	R	A
Query Conservation														.									.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence														.									.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	M	Q	M	L	K	E	T	I	N	E	E	A	A	E	W	D	R	L	H	P	V	A	M	G	P	I	A	P	G	Q	M	R	E	P	R	G	S	D	I	A	G	T	T	S	T	L	Q	E	Q	I	G
Template Known Secondary structure																					S					S	S			T	T											T	T	S	S
Template Predicted Secondary structure
Template SS confidence
		65	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions