Job Description P69805 Confidence 37.42% Date Thu Jan 5 12:12:01 GMT 2012 Rank 1 Aligned Residues 45 % Identity 20% Template c2dmwA_ PDB info PDB header:membrane protein Chain: A: PDB Molecule:synaptobrevin-like 1 variant; PDBTitle: solution structure of the longin domain of synaptobrevin-2 like protein 1 Resolution UNK

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		33	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.										.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.
Predicted Secondary structure																												.	.	.	.	.	.	.	.	.
Query SS confidence																												.	.	.	.	.	.	.	.	.
Query Sequence		N	F	E	R	M	Q	A	L	G	F	C	F	S	M	V	P	A	I	R	R	L	Y	P	E	N	N	.	.	.	.	.	.	.	.	.	E	A	R	K	Q	A	I	R	R	H	L	E	F	F	N	T	Q	P	F
Query Conservation																												.	.	.	.	.	.	.	.	.
Alig confidence																												.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		D	F	E	R	S	R	A	F	N	F	L	N	E	I	K	K	R	F	Q	T	T	Y	G	S	R	A	Q	T	A	P	P	Y	A	M	N	S	E	F	S	S	V	L	A	A	Q	L	K	H	H	S	S	G	P	S
Template Known Secondary structure		S	S																				S						S	S		T	T	S	S																S		T	T
Template Predicted Secondary structure
Template SS confidence
		76	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions