Return to main results Retrieve Phyre Job Id

Job DescriptionQ9JMS6
Confidence5.63%DateThu Jan 5 12:38:02 GMT 2012
Rank27Aligned Residues11
% Identity36%Templatec3rnvA_
PDB info PDB header:hydrolaseChain: A: PDB Molecule:helper component proteinase; PDBTitle: structure of the autocatalytic cysteine protease domain of potyvirus2 helper-component proteinase
Resolution2.00 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   51........60.
Predicted Secondary structure 


Query SS confidence 










Query Sequence  ELIDFSTDGLD
Query Conservation 
 



 



Alig confidence 










Template Conservation 


 

     
Template Sequence  QLIKFTRCNLE
Template Known Secondary structure  SSS
Template Predicted Secondary structure 



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   439440.........
 
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No model constructed - rank, confidence too low




Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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Lawrence Kelley, Benjamin Jefferys 
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