Job Description P75791 Confidence 25.88% Date Thu Jan 5 12:14:10 GMT 2012 Rank 67 Aligned Residues 84 % Identity 25% Template c3thtB_ PDB info PDB header:oxidoreductase Chain: B: PDB Molecule:alkylated dna repair protein alkb homolog 8; PDBTitle: crystal structure and rna binding properties of the rrm/alkb domains2 in human abh8, an enzyme catalyzing trna hypermodification, northeast3 structural genomics consortium target hr5601b Resolution 3.01 Å

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		86	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		G	C	A	V	I	K	G	H	F	P	R	E	Q	A	L	G	W	D	Q	S	M	L	D	Y	L	D	R	N	R	F	D	E	V	Y	K	G	P	G	D	N	F	F	G	T	L	S	A	S	R	P	E	I	Y	P	I	Y	W	S	Q	A	Q	M	Q	A	R	Q	S	E	E	M	A	N	A	Q	S	F	L	N	R	L
Query Conservation
Alig confidence																							.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Conservation																							.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template Sequence		G	L	M	V	V	E	E	I	I	S	S	E	E	E	K	M	L	L	E	S	V	.	.	.	.	.	D	W	R	R	V	K	H	F	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	Y	E	F	N	V	D	K	D	K	P	L	S	G	G	L	P	D	I	C	.	.	E	S	F	L	E	K	W
Template Known Secondary structure		T					T	T		S											T		.	.	.	.	.									S	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	B							S	S		B		S		S					.	.
Template Predicted Secondary structure																							.	.	.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																				.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.						.	.	.	160	.	.	.	.	.																		.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.			.	.	.	.	.	190	.
		166	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.			.	.	.	.	.	.	.	.	200	.	.	.	.	.	.
Predicted Secondary structure																												.	.
Query SS confidence																												.	.
Query Sequence		W	T	F	E	S	D	G	K	Q	W	F	N	P	D	V	S	V	I	Y	P	D	R	I	R	R	R	.	.	P	P	G	T	T	S	K	G	L	G	A	H	T	D	S
Query Conservation																												.	.
Alig confidence												.	.	.	.	.	.	.	.	.	.							.	.					.	.	.
Template Conservation												.	.	.	.	.	.	.	.	.	.													.	.	.
Template Sequence		L	R	K	G	Y	I	K	H	K	P	.	.	.	.	.	.	.	.	.	.	D	Q	M	T	I	N	Q	Y	E	P	G	Q	.	.	.	G	I	P	A	H	I	D	T
Template Known Secondary structure					T	S		S	S			.	.	.	.	.	.	.	.	.	.	S									T	T		.	.	.
Template Predicted Secondary structure												.	.	.	.	.	.	.	.	.	.													.	.	.
Template SS confidence
		212	.	.	.	.	.	.	.	220	.											.	.	.	.	.	.	.	.	230	.	.	.				.	.	.	.	.	.	240	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions