Job Description P75791 Confidence 100.00% Date Thu Jan 5 12:14:10 GMT 2012 Rank 2 Aligned Residues 397 % Identity 98% Template c2dbiA_ PDB info PDB header:structural genomics, unknown function Chain: A: PDB Molecule:hypothetical protein ybiu; PDBTitle: crystal structure of a hypothetical protein jw0805 from2 escherichia coli Resolution 2.05 Å

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		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	F	T	S	D	T	L	P	A	D	H	K	A	A	I	R	Q	M	K	H	A	L	R	A	Q	L	G	D	V	Q	Q	I	F	N	Q	L	S	D	D	I	A	T	R	V	A	E	I	N	A	L	K	A	Q	G	D	A	V	W	P	V	L	S	Y	A	D	I	K	A	G	H	V	T	A	E	Q	R	E	Q	I	K
Query Conservation
Alig confidence
Template Conservation
Template Sequence		T	F	T	S	D	T	L	P	A	D	H	K	A	A	I	R	Q	M	K	H	A	L	R	A	Q	L	G	D	V	Q	Q	I	F	N	Q	L	S	D	D	I	A	T	R	V	A	E	I	N	A	L	K	A	Q	G	D	A	V	W	P	V	L	S	Y	A	D	I	K	A	G	H	V	T	A	E	Q	R	E	Q	I	K
Template Known Secondary structure						S	S			S	S																	S																										T	T				S											T
Template Predicted Secondary structure
Template SS confidence
		4	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	R	G	C	A	V	I	K	G	H	F	P	R	E	Q	A	L	G	W	D	Q	S	M	L	D	Y	L	D	R	N	R	F	D	E	V	Y	K	G	P	G	D	N	F	F	G	T	L	S	A	S	R	P	E	I	Y	P	I	Y	W	S	Q	A	Q	M	Q	A	R	Q	S	E	E	M	A	N	A	Q	S	F	L	N
Query Conservation
Alig confidence																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Sequence		R	R	G	C	A	V	I	K	G	H	F	P	R	E	Q	A	L	G	W	D	Q	S	M	L	D	Y	L	D	R	N	R	F	D	E	V	Y	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	P	E	I	Y	P	I	Y	W	S	Q	A	Q	M	Q	A	R	Q	S	E	E	M	A	N	A	Q	S	F	L	N
Template Known Secondary structure				S						T	S	S																			T	T						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																	T	S
Template Predicted Secondary structure																																						.	.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		84	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.																120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		R	L	W	T	F	E	S	D	G	K	Q	W	F	N	P	D	V	S	V	I	Y	P	D	R	I	R	R	R	P	P	G	T	T	S	K	G	L	G	A	H	T	D	S	G	A	L	E	R	W	L	L	P	A	Y	Q	R	V	F	A	N	V	F	N	G	N	L	A	Q	Y	D	P	W	H	A	A	H	R	T	E	V
Query Conservation
Alig confidence																																																																															.	.	.
Template Conservation																																																																															.	.	.
Template Sequence		R	L	W	T	F	E	S	D	G	K	Q	W	F	N	P	D	V	S	V	I	Y	P	D	R	I	R	R	R	P	P	G	T	T	S	K	G	L	G	A	H	T	D	S	G	A	L	E	R	W	L	L	P	A	Y	Q	R	V	F	A	N	V	F	N	G	N	L	A	Q	Y	D	P	W	H	A	A	H	R	.	.	.
Template Known Secondary structure		T	T	S	B				T	T																					T	T			B									S		S	T												T					T	S		G	G	G			T	T	B		T	T	G	.	.	.
Template Predicted Secondary structure																																																																															.	.	.
Template SS confidence
		164	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240
		244	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	E	Y	T	V	D	N	T	T	K	C	S	V	F	R	T	F	Q	G	W	T	A	L	S	D	M	L	P	G	Q	G	L	L	H	V	V	P	I	P	E	A	M	A	Y	V	L	L	R	P	L	L	D	D	V	P	E	D	E	L	C	G	V	A	P	G	R	V	L	P	V	S	E	Q	W	H	P	L	L	I	E
Query Conservation
Alig confidence		.
Template Conservation		.
Template Sequence		.	T	E	V	E	E	Y	T	V	K	C	S	V	F	R	T	F	Q	G	W	T	A	L	S	D	M	L	P	G	Q	G	L	L	H	V	V	P	I	P	E	A	M	A	Y	V	L	L	R	P	L	L	D	D	V	P	E	D	E	L	C	G	V	A	P	G	R	V	L	P	V	S	E	Q	W	H	P	L	L	I	E
Template Known Secondary structure		.	G	G										S			S							S	S		B		T	T	S	S						S		T	T								G	G	G	S	T	T	S		S	S			T	T			T	T	S						T	T	T						T
Template Predicted Secondary structure		.
Template SS confidence
			241	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	L	T	S	I	P	K	L	E	A	G	D	S	V	W	W	H	C	D	V	I	H	S	V	A	P	V	E	N	Q	Q	G	W	G	N	V	M	Y	I	P	A	A	P	M	C	E	K	N	L	A	Y	A	H	K	V	K	A	A	L	E	K	G	A	S	P	G	D	F	P	R	E	D	Y	E	T	N	W	E	G	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	L	T	S	I	P	K	L	E	A	G	D	S	V	W	W	H	C	D	V	I	H	S	V	A	P	V	E	N	Q	Q	G	W	G	N	V	M	Y	I	P	A	A	P	M	C	E	K	N	L	A	Y	A	H	K	V	K	A	A	L	E	K	G	A	S	P	G	D	F	P	R	E	D	Y	E	T	N	W	E	G	R
Template Known Secondary structure		T							B		T	T							T	T								B	S	S			S									B				S																	T				T	T	S		S			G	G	G	G		S	S
Template Predicted Secondary structure
Template SS confidence
		324	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	T	L	A	D	L	N	I	H	G	K	R	A	L	G	M
Query Conservation
Alig confidence
Template Conservation
Template Sequence		F	T	L	A	D	L	N	I	H	G	K	R	A	L	G	M
Template Known Secondary structure				G	G	G								T	T	T
Template Predicted Secondary structure
Template SS confidence
		404	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.