Job Description P0A769 Confidence 99.93% Date Thu Jan 5 11:04:58 GMT 2012 Rank 1 Aligned Residues 373 % Identity 12% Template c2xq2A_ PDB info PDB header:transport protein Chain: A: PDB Molecule:sodium/glucose cotransporter; PDBTitle: structure of the k294a mutant of vsglt Resolution 2.73 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		25	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.		.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.
Predicted Secondary structure																																														.
Query SS confidence																																														.
Query Sequence		A	F	I	A	A	I	G	Y	I	D	P	G	N	F	A	T	N	I	Q	A	G	A	S	F	G	Y	Q	L	L	W	V	V	V	W	A	N	L	M	A	M	L	I	Q	I	.	L	S	A	K	L	G	I	A	T	G	K	N	L	A	E	Q	I	R	D	H	Y	P	R	P	V	V	W	F	Y	W	V	Q	A	E	I
Query Conservation																																														.
Alig confidence																																														.
Template Conservation
Template Sequence		G	A	S	L	I	A	A	N	I	S	A	E	Q	F	I	G	M	S	G	S	G	Y	S	I	G	L	A	I	A	S	Y	E	W	M	S	A	I	T	L	I	I	V	G	K	Y	F	L	P	I	F	I	E	K	G	I	Y	T	I	P	E	F	V	E	K	R	F	N	K	K	L	K	T	I	L	A	V	F	W	I	S
Template Known Secondary structure							G	G	G	S	S														T		G	G	G	G																T								T	T			S									T
Template Predicted Secondary structure
Template SS confidence
		57	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.
		104	.	.	.	.		.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.
Predicted Secondary structure							.
Query SS confidence							.
Query Sequence		I	A	M	A	T	.	D	L	A	E	F	I	G	A	A	I	G	F	K	L	I	L	G	V	S	L	L	Q	G	A	V	L	T	G	I	A	T	F	L	I	L	M	L	Q	R	R	G	Q	K	P	L	E	K	V	I	G	G	L	L	L	F	V	A	A	A	Y	I	V	E	L	I	F	S	Q	P	N	L	A	Q	L
Query Conservation							.
Alig confidence							.
Template Conservation
Template Sequence		L	Y	I	F	V	N	L	T	S	V	L	Y	L	G	G	L	A	L	E	T	I	L	G	I	P	L	M	Y	S	I	L	G	L	A	L	F	A	L	V	Y	S	I	Y	G	G	V	V	W	T	D	V	I	Q	V	F	F	L	V	L	G	G	F	M	T	T	Y	M	A	V	S	F	I	G	G	T	D	G	W	F	A
Template Known Secondary structure						T																																						T	T																														G	G	G
Template Predicted Secondary structure
Template SS confidence
		137	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.
		183	.	.	.	.	.	.	190	.	.	.	.	.	.															.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.
Predicted Secondary structure																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Query Sequence		G	K	G	M	V	I	P	S	L	P	T	S	E	A	.	.	.	.	.	.	.	.	.	.	.	.	.	.	V	F	L	A	A	G	V	L	G	A	T	I	M	P	H	V	I	Y	L	H	S	S	L	T	Q	H	L	H	G	G	S	R	Q	Q	R	Y	S	A	T	K	W	D	V	A	I	A	M	T	I	A	G	F
Query Conservation																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Alig confidence																.	.	.	.	.	.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		G	V	S	K	M	V	D	A	A	P	G	H	F	E	M	I	L	D	Q	S	N	P	Q	Y	M	N	L	P	G	I	A	V	L	I	G	G	L	W	V	A	N	L	Y	Y	W	G	F	N	Q	Y	I	I	Q	R	T	L	A	A	K	S	V	S	E	A	Q	K	G	I	V	F	A	A	F	L	A	L	I	V	P	F
Template Known Secondary structure											G	G	G	S		S	S			S	S	S	G	G	G	G	T	S		T	T					S	T										T	T	T		S							T	T	S																T	T	T
Template Predicted Secondary structure
Template SS confidence
		220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.
		249	250	.	.	.	.	.	.	.	.	.	260	.	.								.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320
Predicted Secondary structure																.	.	.	.	.	.	.																																																											.
Query SS confidence																.	.	.	.	.	.	.																																																											.
Query Sequence		V	N	L	A	M	M	A	T	A	A	A	A	F	H	.	.	.	.	.	.	.	F	S	G	H	T	G	V	A	D	L	D	E	A	Y	L	T	L	Q	P	L	L	S	H	A	A	A	T	V	F	G	L	S	L	V	A	A	G	L	S	S	T	V	V	G	T	L	A	G	Q	V	V	M	Q	G	F	I	R	F	.
Query Conservation																.	.	.	.	.	.	.																																																											.
Alig confidence																.	.	.	.	.	.	.																																																											.
Template Conservation
Template Sequence		L	V	V	L	P	G	I	A	A	Y	V	I	T	S	D	P	Q	L	M	A	S	L	G	N	L	P	S	A	A	N	A	D	K	A	Y	P	W	L	T	Q	F	L	P	V	G	V	K	G	V	V	F	A	A	L	A	A	A	I	V	S	S	L	A	S	M	L	N	S	T	A	T	I	F	T	M	D	I	Y	K	E
Template Known Secondary structure				T											T														S	T	B	G	G	G								T	S																																			T
Template Predicted Secondary structure
Template SS confidence
		300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.
										321	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.				.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.	.	.	.																								.	.	.
Query SS confidence		.	.	.	.	.	.	.	.																								.	.	.
Query Sequence		.	.	.	.	.	.	.	.	H	I	P	L	W	V	R	R	T	V	T	M	L	P	S	F	I	V	I	L	M	G	L	.	.	.	D	P	T	R	I	L	V	M	S	Q	V	L	L	S	F	G	I	A	L	A	L	V	P	L	L	I	F	T	S	D	S	K	L	M	G	D	L	V	N	S	K	R	V	K	Q	T
Query Conservation		.	.	.	.	.	.	.	.																								.	.	.
Alig confidence		.	.	.	.	.	.	.	.																								.	.	.																																		.	.	.
Template Conservation																																																																					.	.	.
Template Sequence		Y	I	S	P	D	S	G	D	H	K	L	V	N	V	G	R	T	A	A	V	V	A	L	I	I	A	A	L	I	A	P	M	L	G	G	I	G	Q	C	F	Q	Y	I	Q	E	Y	T	G	L	V	S	P	G	I	L	A	V	F	L	L	G	L	F	W	K	K	T	.	.	.	T	S	K	G	A	I	I	G	V	V
Template Known Secondary structure			T		S																										G	G	G	G	G	G		B											T	T	T															T	T		.	.	.
Template Predicted Secondary structure																																																																					.	.	.
Template SS confidence
		385	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.				.	.	.	.	.	.	.	.	460	.
		390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure
Query SS confidence
Query Sequence		G	W	V	I	V	V	L	V	V	A	L
Query Conservation
Alig confidence
Template Conservation
Template Sequence		A	S	I	P	F	A	L	F	L	K	F
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		462	.	.	.	.	.	.	.	470	.	.

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions