Email l.a.kelley@imperial.ac.uk Description P33361 Date Thu Jan 5 11:52:03 GMT 2012 Unique Job ID faac36e4c44a6b0d

Detailed template information

# Template Alignment Coverage 3D Model Confidence % i.d. Template Information

1 d3d31c1 99.9 15 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 2 c3d31D_ 99.9 15 PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans 3 c2onkC_ 99.9 13 PDB header:membrane protein Chain: C: PDB Molecule:molybdate/tungstate abc transporter, permease PDBTitle: abc transporter modbc in complex with its binding protein2 moda 4 d2onkc1 99.9 13 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 5 d3dhwa1 99.8 25 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 6 c2r6gF_ 99.8 15 PDB header:hydrolase/transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter 7 d2r6gf2 99.8 16 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 8 c3fh6F_ 99.8 15 PDB header:transport protein Chain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: crystal structure of the resting state maltose transporter from e.2 coli 9 d2r6gg1 99.6 14 Fold:MetI-like Superfamily:MetI-like Family:MetI-like 10 d1ntca_ 42.9 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 11 d1umqa_ 35.4 19 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 12 c1umqA_ 35.4 19 PDB header:dna-binding protein Chain: A: PDB Molecule:photosynthetic apparatus regulatory protein; PDBTitle: solution structure and dna binding of the effector domain2 from the global regulator prra(rega) from r. sphaeroides:3 insights into dna binding specificity 13 c3e7lD_ 24.1 13 PDB header:transcription regulator Chain: D: PDB Molecule:transcriptional regulator (ntrc family); PDBTitle: crystal structure of sigma54 activator ntrc4's dna binding2 domain 14 d1fipa_ 23.9 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 15 d1etob_ 23.4 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 16 d1etxa_ 19.7 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 17 d1g2ha_ 15.4 13 Fold:DNA/RNA-binding 3-helical bundle Superfamily:Homeodomain-like Family:FIS-like 18 c2jwaA_ 15.1 21 PDB header:transferase Chain: A: PDB Molecule:receptor tyrosine-protein kinase erbb-2; PDBTitle: erbb2 transmembrane segment dimer spatial structure 19 d1jb0j_ 12.6 27 Fold:Single transmembrane helix Superfamily:Subunit IX of photosystem I reaction centre, PsaJ Family:Subunit IX of photosystem I reaction centre, PsaJ 20 c2cw1A_ 11.4 28 PDB header:de novo protein Chain: A: PDB Molecule:sn4m; PDBTitle: solution structure of the de novo-designed lambda cro fold2 protein 21 c2k21A_ not modelled 11.2 12 PDB header:membrane protein Chain: A: PDB Molecule:potassium voltage-gated channel subfamily e PDBTitle: nmr structure of human kcne1 in lmpg micelles at ph 6.0 and2 40 degree c 22 d2auwa1 not modelled 10.7 22 Fold:lambda repressor-like DNA-binding domains Superfamily:lambda repressor-like DNA-binding domains Family:NE0471 C-terminal domain-like 23 c1ciiA_ not modelled 10.2 25 PDB header:transmembrane protein Chain: A: PDB Molecule:colicin ia; PDBTitle: colicin ia 24 d2ns0a1 not modelled 9.6 17 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:RHA1 ro06458-like 25 c3hzqA_ not modelled 9.1 20 PDB header:membrane protein Chain: A: PDB Molecule:large-conductance mechanosensitive channel; PDBTitle: structure of a tetrameric mscl in an expanded intermediate2 state 26 d1i3ja_ not modelled 9.0 19 Fold:DNA-binding domain of intron-encoded endonucleases Superfamily:DNA-binding domain of intron-encoded endonucleases Family:DNA-binding domain of intron-encoded endonucleases 27 d1t1ra3 not modelled 8.8 50 Fold:NAD(P)-binding Rossmann-fold domains Superfamily:NAD(P)-binding Rossmann-fold domains Family:Glyceraldehyde-3-phosphate dehydrogenase-like, N-terminal domain 28 d1rutx4 not modelled 8.8 63 Fold:Glucocorticoid receptor-like (DNA-binding domain) Superfamily:Glucocorticoid receptor-like (DNA-binding domain) Family:LIM domain 29 c2ka2B_ not modelled 8.8 21 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 30 c2ka2A_ not modelled 8.8 21 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles with his173-ser172 intermonomer3 hydrogen bond restraints 31 c2ka1B_ not modelled 8.8 21 PDB header:membrane protein Chain: B: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 32 c2ka1A_ not modelled 8.8 21 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: solution nmr structure of bnip3 transmembrane peptide dimer2 in detergent micelles 33 c2auwB_ not modelled 8.4 16 PDB header:unknown function Chain: B: PDB Molecule:hypothetical protein ne0471; PDBTitle: crystal structure of putative dna binding protein ne0471 from2 nitrosomonas europaea atcc 19718 34 d2phcb1 not modelled 8.3 16 Fold:Cyclophilin-like Superfamily:Cyclophilin-like Family:PH0987 C-terminal domain-like 35 c3mmlD_ not modelled 8.0 26 PDB header:hydrolase Chain: D: PDB Molecule:allophanate hydrolase subunit 1; PDBTitle: allophanate hydrolase complex from mycobacterium smegmatis, msmeg0435-2 msmeg0436 36 d1cf7a_ not modelled 7.8 14 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Cell cycle transcription factor e2f-dp 37 c2kr6A_ not modelled 7.8 21 PDB header:hydrolase Chain: A: PDB Molecule:presenilin-1; PDBTitle: solution structure of presenilin-1 ctf subunit 38 c2d7dB_ not modelled 7.8 23 PDB header:hydrolase/dna Chain: B: PDB Molecule:40-mer from uvrabc system protein b; PDBTitle: structural insights into the cryptic dna dependent atp-ase2 activity of uvrb 39 d1kqfb2 not modelled 7.8 22 Fold:Single transmembrane helix Superfamily:Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor Family:Iron-sulfur subunit of formate dehydrogenase N, transmembrane anchor 40 c1vf5E_ not modelled 7.7 21 PDB header:photosynthesis Chain: E: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 41 c2e75E_ not modelled 7.7 21 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with 2-nonyl-4-2 hydroxyquinoline n-oxide (nqno) from m.laminosus 42 c1vf5R_ not modelled 7.7 21 PDB header:photosynthesis Chain: R: PDB Molecule:protein pet l; PDBTitle: crystal structure of cytochrome b6f complex from m.laminosus 43 c2e74E_ not modelled 7.7 21 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex from m.laminosus 44 d2e74e1 not modelled 7.7 21 Fold:Single transmembrane helix Superfamily:PetL subunit of the cytochrome b6f complex Family:PetL subunit of the cytochrome b6f complex 45 c2e76E_ not modelled 7.7 21 PDB header:photosynthesis Chain: E: PDB Molecule:cytochrome b6-f complex subunit 6; PDBTitle: crystal structure of the cytochrome b6f complex with tridecyl-2 stigmatellin (tds) from m.laminosus 46 c2voyB_ not modelled 7.5 29 PDB header:hydrolase Chain: B: PDB Molecule:sarcoplasmic/endoplasmic reticulum calcium PDBTitle: cryoem model of copa, the copper transporting atpase from2 archaeoglobus fulgidus 47 c2zp2B_ not modelled 7.2 15 PDB header:transferase inhibitor Chain: B: PDB Molecule:kinase a inhibitor; PDBTitle: c-terminal domain of kipi from bacillus subtilis 48 d2nwua1 not modelled 7.1 29 Fold:RL5-like Superfamily:RL5-like Family:SSO1042-like 49 c2hx6A_ not modelled 7.1 29 PDB header:hydrolase Chain: A: PDB Molecule:ribonuclease; PDBTitle: solution structure analysis of the phage t42 endoribonuclease regb 50 d1a9xa1 not modelled 7.0 21 Fold:Carbamoyl phosphate synthetase, large subunit connection domain Superfamily:Carbamoyl phosphate synthetase, large subunit connection domain Family:Carbamoyl phosphate synthetase, large subunit connection domain 51 c2kwvA_ not modelled 7.0 21 PDB header:protein binding/signaling protein Chain: A: PDB Molecule:dna polymerase iota; PDBTitle: solution structure of ubm1 of murine polymerase iota in complex with2 ubiquitin 52 d2pzza1 not modelled 6.8 43 Fold:RL5-like Superfamily:RL5-like Family:SSO1042-like 53 c3c9gB_ not modelled 6.8 14 PDB header:nucleotide binding protein Chain: B: PDB Molecule:upf0200/upf0201 protein af_1395; PDBTitle: crystal structure of uncharacterized upf0201 protein af_135 54 c2j5dA_ not modelled 6.8 21 PDB header:membrane protein Chain: A: PDB Molecule:bcl2/adenovirus e1b 19 kda protein-interacting PDBTitle: nmr structure of bnip3 transmembrane domain in lipid2 bicelles 55 c2k1lA_ not modelled 6.6 35 PDB header:signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3 56 c2k1lB_ not modelled 6.6 35 PDB header:signaling protein Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 6.3 57 c2k1kB_ not modelled 6.6 35 PDB header:signaling protein Chain: B: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3 58 c2k1kA_ not modelled 6.6 35 PDB header:signaling protein Chain: A: PDB Molecule:ephrin type-a receptor 1; PDBTitle: nmr structures of dimeric transmembrane domain of the2 receptor tyrosine kinase epha1 in lipid bicelles at ph 4.3 59 c1pyuD_ not modelled 6.6 40 PDB header:lyase Chain: D: PDB Molecule:aspartate 1-decarboxylase alfa chain; PDBTitle: processed aspartate decarboxylase mutant with ser25 mutated to cys 60 d1st6a6 not modelled 6.5 15 Fold:Four-helical up-and-down bundle Superfamily:alpha-catenin/vinculin-like Family:alpha-catenin/vinculin 61 c3d7aB_ not modelled 6.3 8 PDB header:unknown function Chain: B: PDB Molecule:upf0201 protein ph1010; PDBTitle: crystal structure of duf54 family protein ph1010 from2 hyperthermophilic archaea pyrococcus horikoshii ot3 62 d3cx5c1 not modelled 6.3 7 Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 63 c1twcF_ not modelled 6.2 36 PDB header:transcription Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii 23 PDBTitle: rna polymerase ii complexed with gtp 64 d1ppjc1 not modelled 6.2 12 Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 65 d1twff_ not modelled 6.2 36 Fold:RPB6/omega subunit-like Superfamily:RPB6/omega subunit-like Family:RPB6 66 c2vn2B_ not modelled 6.1 14 PDB header:replication Chain: B: PDB Molecule:chromosome replication initiation protein; PDBTitle: crystal structure of the n-terminal domain of dnad protein2 from geobacillus kaustophilus hta426 67 c2phcB_ not modelled 6.1 16 PDB header:structural genomics, unknown function Chain: B: PDB Molecule:uncharacterized protein ph0987; PDBTitle: crystal structure of conserved uncharacterized protein ph0987 from2 pyrococcus horikoshii 68 c2pmzW_ not modelled 6.1 29 PDB header:translation, transferase Chain: W: PDB Molecule:dna-directed rna polymerase subunit k; PDBTitle: archaeal rna polymerase from sulfolobus solfataricus 69 c2rnoA_ not modelled 6.1 38 PDB header:ligase Chain: A: PDB Molecule:putative dna-binding protein; PDBTitle: solution structure of the n-terminal sap domain of sumo e3 ligases2 from oryza sativa 70 d1rh5b_ not modelled 6.0 14 Fold:Single transmembrane helix Superfamily:Preprotein translocase SecE subunit Family:Preprotein translocase SecE subunit 71 c3mkuA_ not modelled 6.0 17 PDB header:transport protein Chain: A: PDB Molecule:multi antimicrobial extrusion protein (na(+)/drug PDBTitle: structure of a cation-bound multidrug and toxin compound extrusion2 (mate) transporter 72 c2nq2A_ not modelled 5.9 18 PDB header:metal transport Chain: A: PDB Molecule:hypothetical abc transporter permease protein PDBTitle: an inward-facing conformation of a putative metal-chelate2 type abc transporter. 73 d1i1ga1 not modelled 5.7 16 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 74 d2cyya1 not modelled 5.6 9 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:Lrp/AsnC-like transcriptional regulator N-terminal domain 75 d1quba5 not modelled 5.6 14 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 76 d1c1za5 not modelled 5.6 15 Fold:Complement control module/SCR domain Superfamily:Complement control module/SCR domain Family:Complement control module/SCR domain 77 d2hwna1 not modelled 5.6 32 Fold:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Superfamily:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit Family:Dimerization-anchoring domain of cAMP-dependent PK regulatory subunit 78 c3skqA_ not modelled 5.5 13 PDB header:metal transport Chain: A: PDB Molecule:mitochondrial distribution and morphology protein 38; PDBTitle: mdm38 is a 14-3-3-like receptor and associates with the protein2 synthesis machinery at the inner mitochondrial membrane 79 d1bccc2 not modelled 5.4 11 Fold:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Superfamily:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) Family:a domain/subunit of cytochrome bc1 complex (Ubiquinol-cytochrome c reductase) 80 d1qkla_ not modelled 5.4 36 Fold:RPB6/omega subunit-like Superfamily:RPB6/omega subunit-like Family:RPB6 81 c1vc3B_ not modelled 5.4 30 PDB header:lyase Chain: B: PDB Molecule:l-aspartate-alpha-decarboxylase heavy chain; PDBTitle: crystal structure of l-aspartate-alpha-decarboxylase 82 c3s1bA_ not modelled 5.4 19 PDB header:signaling protein Chain: A: PDB Molecule:mini-z; PDBTitle: the development of peptide-based tools for the analysis of2 angiogenesis 83 c3gucB_ not modelled 5.3 29 PDB header:transferase Chain: B: PDB Molecule:ubiquitin-like modifier-activating enzyme 5; PDBTitle: human ubiquitin-activating enzyme 5 in complex with amppnp 84 c3iwcD_ not modelled 5.2 17 PDB header:lyase Chain: D: PDB Molecule:s-adenosylmethionine decarboxylase; PDBTitle: t. maritima adometdc complex with s-adenosylmethionine2 methyl ester 85 d1jhfa1 not modelled 5.2 15 Fold:DNA/RNA-binding 3-helical bundle Superfamily:"Winged helix" DNA-binding domain Family:LexA repressor, N-terminal DNA-binding domain 86 d1pgja1 not modelled 5.1 7 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain 87 d1nvma1 not modelled 5.1 6 Fold:RuvA C-terminal domain-like Superfamily:post-HMGL domain-like Family:DmpG/LeuA communication domain-like 88 d2pgda1 not modelled 5.1 9 Fold:6-phosphogluconate dehydrogenase C-terminal domain-like Superfamily:6-phosphogluconate dehydrogenase C-terminal domain-like Family:Hydroxyisobutyrate and 6-phosphogluconate dehydrogenase domain 89 c2ijlB_ not modelled 5.0 25 PDB header:transcription Chain: B: PDB Molecule:molybdenum-binding transcriptional repressor; PDBTitle: the structure of a putative mode from agrobacterium tumefaciens. 90 d1ui5a2 not modelled 5.0 16 Fold:Tetracyclin repressor-like, C-terminal domain Superfamily:Tetracyclin repressor-like, C-terminal domain Family:Tetracyclin repressor-like, C-terminal domain 91 c3h0gF_ not modelled 5.0 36 PDB header:transcription Chain: F: PDB Molecule:dna-directed rna polymerases i, ii, and iii PDBTitle: rna polymerase ii from schizosaccharomyces pombe 92 d1oxwa_ not modelled 5.0 29 Fold:FabD/lysophospholipase-like Superfamily:FabD/lysophospholipase-like Family:Patatin