Job Description P33361 Confidence 99.89% Date Thu Jan 5 11:52:03 GMT 2012 Rank 2 Aligned Residues 235 % Identity 15% Template c3d31D_ PDB info PDB header:transport protein Chain: D: PDB Molecule:sulfate/molybdate abc transporter, permease PDBTitle: modbc from methanosarcina acetivorans Resolution 3.00 Å

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		138	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.		.	.	.	210	.	.	.	.	.	.
Predicted Secondary structure																																																																							.
Query SS confidence																																																																							.
Query Sequence		W	L	L	H	M	Q	I	A	I	I	P	L	W	L	L	Y	S	G	T	L	N	D	L	S	L	M	K	E	Y	A	N	R	Q	D	V	F	D	D	A	L	A	Q	H	L	T	L	L	F	G	A	V	L	P	A	L	V	I	G	V	P	L	G	I	W	C	Y	F	S	T	.	A	R	Q	G	A	I	F	S	L	L
Query Conservation																																																																							.
Alig confidence																																			.																																				.
Template Conservation																																			.
Template Sequence		L	V	L	F	L	F	I	F	L	T	L	S	N	M	I	F	E	Q	I	T	E	D	F	S	G	L	V	K	A	A	G	N	R	.	S	V	I	S	S	I	F	L	S	L	Y	A	G	F	L	A	T	L	L	A	L	L	L	G	A	P	T	G	Y	I	L	A	R	F	D	F	P	G	K	R	L	V	E	S	I	I
Template Known Secondary structure																							T												.																																T	T				T	T
Template Predicted Secondary structure																																			.
Template SS confidence
		23	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.		.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.
		217	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		N	V	I	Q	T	V	P	S	V	A	L	F	G	L	L	I	A	P	L	A	A	L	V	T	A	F	P	W	L	G	T	L	G	I	A	G	T	G	M	T	P	A	L	I	A	L	V	L	Y	A	L	L	P	L	V	R	G	V	V	V	G	L	N	Q	I	P	R	D	V	L	E	S	A	R	A	M	G	M	S	G
Query Conservation
Alig confidence
Template Conservation
Template Sequence		D	V	P	V	V	V	P	H	T	V	A	G	I	A	L	L	T	V	F	G	S	R	G	L	I	G	E	P	L	E	S	Y	I	Q	F	R	D	A	L	P	G	I	V	V	A	M	L	F	V	S	M	P	Y	L	A	N	S	A	R	E	G	F	K	S	V	D	P	R	L	E	N	A	A	R	S	L	G	A	P	L
Template Known Secondary structure			G	G	G	T	S														S	T	T	S	T	T	T	G	G	G	T	T	T				T	T	S																											S											T	T
Template Predicted Secondary structure
Template SS confidence
		102	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.
		297	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.			.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.
Predicted Secondary structure																																											.	.
Query SS confidence																																											.	.
Query Sequence		A	Q	R	F	L	H	V	Q	L	P	L	A	L	P	V	F	L	R	S	L	R	V	V	M	V	Q	T	V	G	M	A	V	I	A	A	L	I	G	A	G	G	.	.	F	G	A	L	V	F	Q	G	L	L	S	S	A	I	D	L	V	L	L	G	V	I	P	V	I	V	L	A	V	L	T	D	A	L	F	D
Query Conservation																																											.	.
Alig confidence																																											.	.
Template Conservation
Template Sequence		W	K	A	F	F	F	V	T	L	P	L	S	A	R	Y	L	L	I	G	S	V	M	T	W	A	R	A	I	S	E	F	G	A	V	V	I	L	A	Y	Y	P	M	V	G	P	T	L	I	Y	D	R	F	I	S	Y	G	L	S	A	S	R	P	I	A	V	L	L	I	L	V	T	L	S	I	F	L	V	I	R
Template Known Secondary structure								T																						T											T	T														S	T	T	T	T	T
Template Predicted Secondary structure
Template SS confidence
		182	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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