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Job DescriptionP33361
Confidence99.82%DateThu Jan 5 11:52:03 GMT 2012
Rank6Aligned Residues215
% Identity15%Templatec2r6gF_
PDB info PDB header:hydrolase/transport proteinChain: F: PDB Molecule:maltose transport system permease protein malf; PDBTitle: the crystal structure of the e. coli maltose transporter
Resolution2.80 Å

  Insertion relative to template
  Deletion relative to template
  Catalytic residue from the CSA
 
Detailed help on interpreting your alignment


   157..160.........170.........180.........190.........200...... ...210.........220.........230.....
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Query Sequence  LNDLSLMKEYANRQDVFDDALAQHLTLLFGAVLPALVIGVPLGIWCYFST. ARQGAIFSLLNVIQTVPSVALFGLLIAPL
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Template Sequence  WKNFTRVFTDEGIQKPFLAIFVWTVVFSLITVFLTVAVGMVLACLVQWEALRGKAVYRVLLILPYAVPSFISILIFKGLF
Template Known Secondary structure  TTTTSGGGT
TTTSTTT
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   261........270.........280.........290.........300.........310.........320.........330.........340
 
   236.. .240.........250.........260.........270.........280.........290.........300......
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Query Sequence  AAL. . . . . . . . . VTAFPWLGTLGIAGTGMTPALIALVLYALLPLVRGVVVGLNQIPRDVLESARAMGMSGAQRFLHVQLP
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Template Sequence  NQSFGEINMMLSALFGVKPAWFSDPTTARTMLIIVNTWLGYPYMMILCMGLLKAIPDDLYEASAMDGAGPFQNFFKITLP
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TTTSGGGS
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   341........350.........360.........370.........380.........390.........400.........410.........420
 
   307..310.........320.........330....... ..340......... 350.........360.......
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Query Sequence  LALPVFLRSLRVVMVQTVGMAVIAALIGAGG. . . . . . . . . . . . . . . FGALVFQGLLSS. . . . AIDLVLLGVIPVIVLAVL
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Template Sequence  LLIKPLTPLMIASFAFNFNNFVLIQLLTNGGPDRLGTTTPAGYTDLLVNYTYRIAFEGGGGQDFGLAAAIATLIFLLVGA
Template Known Secondary structure  GTT

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   421........430.........440.........450.........460.........470.........480.........490.........500
 
   368.370.
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Query Sequence  TDAL
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Template Sequence  LAIV
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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
 
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