Job Description P37653 Confidence 99.96% Date Wed Jan 25 15:20:53 GMT 2012 Rank 6 Aligned Residues 256 % Identity 16% Template d1xhba2 SCOP info Nucleotide-diphospho-sugar transferases Nucleotide-diphospho-sugar transferases Polypeptide N-acetylgalactosaminyltransferase 1, N-terminal domain Resolution 2.50

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		255	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.							.	.
Predicted Secondary structure																																																																										.	.	.	.	.	.
Query SS confidence																																																																										.	.	.	.	.	.
Query Sequence		V	W	P	L	N	R	Q	P	V	P	L	P	K	D	M	S	L	W	P	S	V	D	I	F	V	P	T	Y	N	E	D	L	N	V	V	K	N	T	I	Y	A	S	L	G	I	D	W	P	K	D	K	L	N	I	W	I	L	D	D	G	G	R	E	E	F	R	Q	F	A	Q	N	V	.	.	.	.	.	.	G	V
Query Conservation																																																																										.	.	.	.	.	.
Alig confidence																	.	.	.																																																							.	.	.	.	.	.
Template Conservation																	.	.	.
Template Sequence		V	R	L	E	G	C	K	T	K	V	Y	P	D	N	L	.	.	.	P	T	T	S	V	V	I	V	F	H	N	E	A	W	S	T	L	L	R	T	V	H	S	V	I	N	R	S	P	R	H	M	I	E	E	I	V	L	V	D	D	A	S	E	R	D	F	L	K	R	P	L	E	S	Y	V	K	K	L	K	V	P
Template Known Secondary structure			S		G	G	G	G	T					S			.	.	.										S	S																S	S		G	G	G										S				G	G	G	T									S	S	S	S
Template Predicted Secondary structure																	.	.	.
Template SS confidence
		101	.	.	.	.	.	.	.	.	110	.	.	.	.	.				.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.
		329	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		K	Y	I	A	R	T	T	H	E	H	A	K	A	G	N	I	N	N	A	L	K	Y	A	K	G	E	F	V	S	I	F	D	C	D	H	V	P	T	R	S	F	L	Q	M	T	M	G	W	F	L	K	E	K	Q	L	A	M	M	Q	T	P	H	H	F	F	S	P	D	P	F	E	R	N	L	G	R	F	R	K	T
Query Conservation
Alig confidence																																																									.
Template Conservation																																																									.
Template Sequence		V	H	V	I	R	M	E	Q	R	S	G	L	I	R	A	R	L	K	G	A	A	V	S	R	G	Q	V	I	T	F	L	D	A	H	C	E	C	T	A	G	W	L	E	P	L	L	A	R	I	K	H	D	R	R	T	.	V	V	C	P	I	I	D	V	I	S	D	D	T	F	E	Y	M	A	G	S	D	M	T	Y
Template Known Secondary structure								S	S																	S	S							S	S					T	T													T	T		.											S	S	S								T	T
Template Predicted Secondary structure																																																									.
Template SS confidence
		178	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.		.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.
		409	410													.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.				.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.
Predicted Secondary structure				.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence				.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		P	N	.	.	.	.	.	.	.	.	.	.	.	.	E	G	T	L	F	Y	G	L	V	Q	D	G	N	D	M	W	D	A	T	F	F	C	G	S	C	A	V	I	R	R	K	P	L	D	E	I	G	G	I	A	V	E	T	V	T	.	.	.	E	D	A	H	T	S	L	R	L	H	R	R	G	Y	T	S	A	Y
Query Conservation				.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence				.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		G	G	F	N	W	K	L	N	F	R	W	Y	P	V	P	Q	R	E	M	D	R	R	K	G	D	R	T	L	P	V	R	T	P	T	M	A	G	G	L	F	S	I	D	R	D	Y	F	Q	E	I	G	T	Y	D	A	G	M	D	I	W	G	G	E	N	L	E	I	S	F	R	I	W	Q	C	G	G	T	L	E	I
Template Known Secondary structure						T	T																T	T	T		T	T	S					S	B			S	S	S											T	T	S			T	T	S		T	T					S									T	T
Template Predicted Secondary structure
Template SS confidence
		257	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.
		474	.	.	.	.	.	480		.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.
Predicted Secondary structure									.
Query SS confidence									.
Query Sequence		M	R	I	P	Q	A	A	.	G	L	A	T	E	S	L	S	A	H	I	G	Q	R	I	R	W	A	R	G	M	V	Q	I	F	R	L	D	N	P	L	T	G	K
Query Conservation									.
Alig confidence									.
Template Conservation
Template Sequence		V	T	C	S	H	V	G	H	V	F	G	Q	I	I	N	K	N	N	R	R	L	A	E	V	W	M	D	E	F	K	N	F	F	Y	I	I	S	P	G	V	T	K
Template Known Secondary structure																												G	G	G	G						T	S	T	T	G	G	G
Template Predicted Secondary structure
Template SS confidence
		337	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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