Job Description P37653 Confidence 99.97% Date Wed Jan 25 15:20:53 GMT 2012 Rank 1 Aligned Residues 237 % Identity 21% Template c2z86D_ PDB info PDB header:transferase Chain: D: PDB Molecule:chondroitin synthase; PDBTitle: crystal structure of chondroitin polymerase from2 escherichia coli strain k4 (k4cp) complexed with udp-glcua3 and udp Resolution 2.40 Å

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		256	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.												.	.	.	.	.	.	.	280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.
Predicted Secondary structure																			.	.	.	.	.	.	.	.	.	.	.
Query SS confidence																			.	.	.	.	.	.	.	.	.	.	.
Query Sequence		W	P	L	N	R	Q	P	V	P	L	P	K	D	M	S	L	W	.	.	.	.	.	.	.	.	.	.	.	P	S	V	D	I	F	V	P	T	Y	N	E	D	L	N	V	V	K	N	T	I	Y	A	S	L	G	I	D	W	P	K	D	K	L	N	I	W	I	L	D	D	G	G	R	E	E	F	R	Q	F	A	Q
Query Conservation																			.	.	.	.	.	.	.	.	.	.	.
Alig confidence																			.	.	.	.	.	.	.	.	.	.	.														.																			.
Template Conservation																																											.																			.
Template Sequence		W	P	S	D	L	T	L	P	P	L	P	E	S	T	N	D	Y	V	W	A	G	K	R	K	E	L	I	I	D	G	L	S	I	V	I	P	T	Y	N	R	A	.	K	I	L	A	I	T	L	A	C	L	C	N	Q	K	T	I	Y	D	.	Y	E	V	I	V	A	D	D	G	S	K	E	N	I	E	E	I	V	R
Template Known Secondary structure		S		T	T								S	S	T	T																								S			.												T				S	S		.									S		S	S
Template Predicted Secondary structure																																											.																			.
Template SS confidence
		114	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.		.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.		.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.
		325	.	.					.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400
Predicted Secondary structure					.	.	.	.
Query SS confidence					.	.	.	.
Query Sequence		N	V	G	.	.	.	.	V	K	Y	I	A	R	T	T	H	E	H	A	K	A	G	N	I	N	N	A	L	K	Y	A	K	G	E	F	V	S	I	F	D	C	D	H	V	P	T	R	S	F	L	Q	M	T	M	G	W	F	L	K	E	K	Q	L	A	M	M	Q	T	P	H	H	F	F	S	P	D	P	F	E	R
Query Conservation					.	.	.	.
Alig confidence					.	.	.	.
Template Conservation
Template Sequence		E	F	E	S	L	L	N	I	K	Y	V	R	Q	K	D	Y	G	Y	Q	L	C	A	V	R	N	L	G	L	R	A	A	K	Y	N	Y	V	A	I	L	D	C	D	M	A	P	N	P	L	W	V	Q	S	Y	M	E	L	L	A	V	D	D	N	V	A	L	I	G	P	R	K	Y	I	D	T	S	K	H	T	Y	L
Template Known Secondary structure			T	T	T	T	S											S	S															S	S							T	T					T	T													T	T										B			T	T
Template Predicted Secondary structure
Template SS confidence
		200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.
		401	.	.	.	.	.	.	.	.																								410	.	.	.	.	.	.	.	.	.	420	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.
Predicted Secondary structure											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query SS confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Query Sequence		N	L	G	R	F	R	K	T	P	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	N	E	G	T	L	F	Y	G	L	V	Q	D	G	N	D	M	W	D	A	T	F	F	C	G	S	C	A	V	I	R	R	K	P	L	D	E	I	G	G	I	A	V	E	T	V	.	.	.
Query Conservation											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Alig confidence											.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																																														.	.	.
Template Conservation
Template Sequence		D	F	L	S	Q	K	S	L	I	N	E	I	P	E	I	I	T	N	N	Q	V	A	G	K	V	E	Q	N	K	S	V	D	W	R	I	E	H	F	K	N	T	D	N	L	R	L	C	N	T	P	F	R	F	F	S	G	G	N	V	A	F	A	K	K	W	L	F	R	A	G	W	F	D	E	E	F	T	H	W	G
Template Known Secondary structure							T	T	G	G	G	T	S		B							S	S	S																	T	T	T	T	T	T	T		S		G	G	G	G			T	T						G	G	G									T	T		S	S	S
Template Predicted Secondary structure
Template SS confidence
		280	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350	.	.	.	.	.	.	.	.	.
		455	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		T	E	D	A	H	T	S	L	R	L	H	R	R	G	Y	T	S	A	Y	M	R	I	P	Q	A	A	G	L	A	T	E	S	L	S	A	H	I	G	Q	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		G	E	D	N	E	F	G	Y	R	L	Y	R	E	G	C	Y	F	R	S	V	E	G	A	M	A	Y	H	Q	E	P	P	G	T	V	Q	L	L	Q	Q	K
Template Known Secondary structure														T	T							G	G	G
Template Predicted Secondary structure
Template SS confidence
		360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.

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Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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