Job Description P37653 Confidence 25.36% Date Wed Jan 25 15:20:53 GMT 2012 Rank 106 Aligned Residues 87 % Identity 10% Template c2vbgB_ PDB info PDB header:lyase Chain: B: PDB Molecule:branched-chain alpha-ketoacid decarboxylase; PDBTitle: the complex structure of the branched-chain keto acid2 decarboxylase (kdca) from lactococcus lactis with 2r-1-3 hydroxyethyl-deazathdp Resolution 1.80 Å

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		293	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.																			.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.					.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Predicted Secondary structure																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query SS confidence																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Query Sequence		I	Y	A	S	L	G	I	D	W	P	K	D	K	L	N	I	W	I	L	D	D	G	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	G	R	E	E	F	R	Q	F	A	Q	N	V	G	V	K	Y	I	A	.	.	.	.	R	T	T	H	E	H	A	K	A	G	N	I	N	N	A	L	K	Y
Query Conservation																								.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Alig confidence												.	.	.										.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.	.																			.	.	.	.
Template Conservation												.	.	.
Template Sequence		L	G	L	S	I	R	E	K	L	N	.	.	.	P	I	C	F	I	I	N	N	D	G	Y	T	V	E	R	E	I	H	G	P	T	Q	S	Y	N	D	I	P	M	W	N	Y	S	K	L	P	E	T	F	G	A	T	E	D	R	V	V	S	K	I	V	R	T	E	N	E	F	V	S	V	M	K	E	A	Q	A	D
Template Known Secondary structure								T	T			.	.	.								S	S	S								S		T	T		G	G	G							G	G	G					T	T			T	T	T								B
Template Predicted Secondary structure												.	.	.
Template SS confidence
		439	440	.	.	.	.	.	.	.	.				.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.
		351	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		A	K	G	E	F	V	S	I	F	D	C	D	H	V	P	T	R	S	F	L	Q	M	T	M	G	W	F	L	K	E	K	Q
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	N	R	M	Y	W	I	E	L	V	L	E	K	E	D	A	P	K	L	L	K	K	M	G	K	L	F	A	E	Q	N	K
Template Known Secondary structure		T	T	S										T	T																	T
Template Predicted Secondary structure
Template SS confidence
		516	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions