Job Description P75973 Confidence 3.33% Date Thu Jan 5 12:16:41 GMT 2012 Rank 32 Aligned Residues 79 % Identity 20% Template c2v8sV_ PDB info PDB header:protein transport Chain: V: PDB Molecule:vesicle transport through interaction with PDBTitle: vti1b habc domain - epsinr enth domain complex Resolution 2.22 Å

Show / Hide SS confidence

Show / Hide Conservation and Alignment quality

		3	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		E	Q	N	L	K	H	V	I	A	L	L	L	E	D	A	K	R	L	Q	Q	I	E	P	N	A	G	T	E	A	R	I	L	L	A	K	Q	A	L	K	T	C	G	A	Q	A	P	G	R	T	E	F	M	N	F	M	A	N	T	L	T	P	L	P	C	N	G	E	K	V	S	R	V	Y	H	D	T	M	V	K	A
Query Conservation
Alig confidence													.	.	.																	.	.	.	.																																.	.	.	.
Template Conservation													.	.	.																	.	.	.	.																																.	.	.	.
Template Sequence		H	E	I	F	R	G	L	L	E	D	L	.	.	.	Q	G	V	P	E	R	L	L	G	T	A	G	T	E	E	K	.	.	.	.	K	K	L	V	R	D	F	D	E	K	Q	Q	E	A	N	E	T	L	A	E	M	E	E	E	L	R	Y	A	P	L	T	.	.	.	.	F	R	N	P	M	M	S	K	L	R	N
Template Known Secondary structure													.	.	.		T	S	T	T	T	S	S	S				S				.	.	.	.																										T	T	S				.	.	.	.
Template Predicted Secondary structure													.	.	.																	.	.	.	.																																.	.	.	.
Template SS confidence
		15	.	.	.	.	20	.	.	.	.	.				.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.					.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.					.	.	.	.	.	.	.	80	.	.	.
		83	.	.	.	.	.	.	90	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		L	R	I	E	L	D	G	L	R	R
Query Conservation
Alig confidence
Template Conservation
Template Sequence		Y	R	K	D	L	A	K	L	H	R
Template Known Secondary structure
Template Predicted Secondary structure
Template SS confidence
		84	.	.	.	.	.	90	.	.	.

No model constructed - rank, confidence too low

---

Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions