Job Description P0AB93 Confidence 0.56% Date Thu Jan 5 11:14:57 GMT 2012 Rank 73 Aligned Residues 156 % Identity 12% Template c2xutC_ PDB info PDB header:transport protein Chain: C: PDB Molecule:proton/peptide symporter family protein; PDBTitle: crystal structure of a proton dependent oligopeptide (pot)2 family transporter. Resolution 3.62 Å

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		62	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.			.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130
Predicted Secondary structure																																					.	.																																			.	.	.	.	.	.	.	.	.
Query SS confidence																																					.	.																																			.	.	.	.	.	.	.	.	.
Query Sequence		A	V	I	I	I	S	L	L	L	D	E	S	G	F	F	E	W	A	A	L	H	V	S	R	W	G	N	G	R	G	R	L	L	F	T	.	.	W	I	V	L	L	G	A	A	V	A	A	L	F	A	N	D	G	A	A	L	I	L	T	P	I	V	I	A	M	L	L	A	L	G	.	.	.	.	.	.	.	.	.
Query Conservation																																					.	.																																			.	.	.	.	.	.	.	.	.
Alig confidence																																					.	.																																			.	.	.	.	.	.	.	.	.
Template Conservation
Template Sequence		A	K	D	V	F	H	S	F	V	I	G	V	Y	F	F	P	L	L	G	G	W	I	A	D	R	F	F	G	K	Y	N	T	I	L	W	L	S	L	I	Y	C	V	G	H	A	F	L	A	I	F	E	H	S	V	Q	G	F	Y	T	G	L	F	L	I	A	L	G	S	G	G	I	K	P	L	V	S	S	F	M	G
Template Known Secondary structure																T									T	T	S	S		S																					T	S	S																		T	T
Template Predicted Secondary structure
Template SS confidence
		56	.	.	.	60	.	.	.	.	.	.	.	.	.	70	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.
							131	.	.	.	.	.	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.
Predicted Secondary structure		.	.	.	.	.
Query SS confidence		.	.	.	.	.
Query Sequence		.	.	.	.	.	F	S	K	G	T	T	L	A	F	V	M	A	A	G	F	I	A	D	T	A	S	L	P	L	I	V	S	N	L	V	N	I	V	S	A	D	F	F	G	L	G	F	R	E	Y	A	S	V	M	V	P	V	D	I	A	A	I	V	A	T	L	V	M	L	H	L	Y	F	R	K	D	I	P	Q	N
Query Conservation		.	.	.	.	.
Alig confidence		.	.	.	.	.																															.	.	.	.	.	.	.	.	.	.	.
Template Conservation																																					.	.	.	.	.	.	.	.	.	.	.
Template Sequence		D	Q	F	D	Q	S	N	K	S	L	A	Q	K	A	F	D	M	F	Y	F	T	I	N	F	G	S	F	F	A	S	L	S	M	P	L	.	.	.	.	.	.	.	.	.	.	.	L	L	K	N	F	G	A	A	V	A	F	G	I	P	G	V	L	M	F	V	A	T	V	F	F	W	L	G	R	K	R	Y	I	H
Template Known Secondary structure			T		S	T	T	T	T	T																							T	S	T		.	.	.	.	.	.	.	.	.	.	.				T	S																						S	S	S	S	S
Template Predicted Secondary structure																																					.	.	.	.	.	.	.	.	.	.	.
Template SS confidence
		136	.	.	.	140	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170												.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.
		206	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		Y	D	M	A	L	L	K	S	P	A	E	A	I	K	D	P	A	T	F	K	T	G	W
Query Conservation
Alig confidence
Template Conservation
Template Sequence		M	P	V	E	G	K	G	N	I	G	L	V	L	A	L	I	G	G	V	S	A	A	Y
Template Known Secondary structure					T	T
Template Predicted Secondary structure
Template SS confidence
		205	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
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