Job Description P0AB93 Confidence 1.02% Date Thu Jan 5 11:14:57 GMT 2012 Rank 35 Aligned Residues 68 % Identity 6% Template c2ksaA_ PDB info PDB header:neuropeptide receptor/neuropeptide Chain: A: PDB Molecule:substance-p receptor; PDBTitle: substance p in dmpc/chaps isotropic q=0.25 bicelles as a ligand for2 nk1r Resolution UNK

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		172	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.
Predicted Secondary structure
Query SS confidence
Query Sequence		F	R	E	Y	A	S	V	M	V	P	V	D	I	A	A	I	V	A	T	L	V	M	L	H	L	Y	F	R	K	D	I	P	Q	N	Y	D	M	A	L	L	K	S	P	A	E	A	I	K	D	P	A	T	F	K	T	G	W	V	V	L	L	L	L	L	V	G	F	F
Query Conservation
Alig confidence
Template Conservation
Template Sequence		V	Y	H	I	C	V	T	V	L	I	Y	F	L	P	L	L	V	I	G	Y	A	Y	T	V	V	G	I	T	L	W	A	S	E	I	P	G	D	S	S	D	R	Y	H	E	Q	V	S	A	K	R	K	V	V	K	M	M	I	V	V	V	C	T	F	A	I	C	W	L
Template Known Secondary structure												T																	S	S		S				S	S	S	S	S	S		S	S
Template Predicted Secondary structure
Template SS confidence
		195	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.

No model constructed - rank, confidence too low

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Phyre is for academic use only

Please cite: Protein structure prediction on the web: a case study using the Phyre server
Kelley LA and Sternberg MJE. Nature Protocols 4, 363 - 371 (2009) [pdf] [Import into BibTeX]
© Structural Bioinformatics Group, Imperial College, London Lawrence Kelley, Benjamin Jefferys   Disclaimer Terms and Conditions